Gramella portivictoriae sp. nov., a novel member of the family Flavobacteriaceae isolated from marine sediment

Lau, S. S.; Tsoi, Mandy Man Yee; Li, Xiancui; Plakhotnikova, Ioulia; Dobretsov, Sergey; Wong, Po Keung; Qian, Pei‐Yuan

doi:10.1099/ijs.0.63824-0

Cited by 35 publications

(40 citation statements)

References 15 publications

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“… Data from Dobson et al (1993), Nedashkovskaya et al (2003, 2005a, b), Bowman et al (1998), Lau et al (2005a, b, 2006). …”

Section: Resultsmentioning

confidence: 99%

“… Data from Dobson et al (1993), Nedashkovskaya et al (2003, 2004, 2005a, b, c, 2006), Ivanova et al (2006), Lau et al (2005a, b, 2006), Bowman et al (1998), Donachie et al (2004), Yoon et al (2005), Pinhassi et al (2006). …”

Section: Resultsmentioning

confidence: 99%

“…À , negative; 1, positive; ND, not determined; v, variable. Data from Dobson et al (1993), Nedashkovskaya et al (2003Nedashkovskaya et al ( , 2004Nedashkovskaya et al ( , 2005aNedashkovskaya et al ( , b, c, 2006, Ivanova et al (2006), Lau et al (2005aLau et al ( , b, 2006, Bowman et al (1998), Donachie et al (2004), Yoon et al (2005), Pinhassi et al (2006). in length, coccoid bodies appear in aging cultures. Nondiffusible yellow pigments are produced.…”

Section: Description Of Wangia Profunda Sp Novmentioning

confidence: 98%

“…On marine agar, colonies are circular, 1-3 mm in diameter, convex with smooth surfaces and yellow to orange in color. Rods are from 0.3 to 0.6 mm in width and from 1.5 to 3.3 mm Nedashkovskaya et al (2003Nedashkovskaya et al ( , 2005a, Bowman et al (1998), Lau et al (2005aLau et al ( , b, 2006. Coccoid bodies in aging cultures 1 À À À 1 À À À À Gliding motility 1, SM-A87 T ; 2, Salegentibacter (4) (in parentheses is the number of species compared); 3, Mesonia (2); 4, Gramella (2); 5, Psychroflexus (2); 6, Nonlabens (1); 7, Dokdonia (1); 8, Leeuwenhoekiella (2) 9, Stenothermobacter (1).…”

Section: Description Of Wangia Profunda Sp Novmentioning

confidence: 99%

“…In recent years, several new genera of the Flavobacteriaceae have been described, e.g. Mesonia , Gramella , Leeuwenhoekiella, Nonlabens , Stenothermobacter , Dokdonia and Sandarakinotalea (Nedashkovskaya et al , 2003, 2005a, b; Lau et al , 2005a, b, 2006; Yoon et al , 2005; Khan et al , 2006). In this study, the bacterial strain SM‐A87 T originating from marine sediment is proposed to represent a novel genus of the family Flavobacteriaceae .…”

Section: Introductionmentioning

confidence: 99%

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Wangia profunda gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment

Qin

Zhao

Wang

et al. 2007

FEMS Microbiology Letters

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An orange-pigmented, Gram-negative, nonmotile, strictly aerobic and oxidase- and catalase-positive bacterium (SM-A87(T)) was isolated from the deep-sea sediment of the southern Okinawa Trough area. The main fatty acids were i15 : 0, i17 : 0 3OH, i15 : 1 G, i17 : 1 omega 9c, 15 : 0, i15 : 0 3OH and summed feature 3 (comprising i-15 : 0 2OH and/or 16 : 1 omega 7c). MK-6 was the predominant respiratory quinone. DNA G+C content was 35.8 mol%. Flexirubin-type pigments were absent. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain SM-A87(T) formed a distinct lineage within the family Flavobacteriaceae, with <93% sequence similarity to the nearest strain of genus Salegentibacter. Moreover, strain SM-A87(T) could be distinguished from the nearest phylogenetic neighbors by a number of chemotaxonomic and phenotypic properties. On the basis of polyphasic analyses, it is proposed that strain SM-A87(T) be classified in a novel genus and a new species in the family Flavobacteriaceae, designated Wangia profunda gen. nov., sp. nov. The type strain is SM-A87(T) (CCTCC AB 206139(T)=DSM 18752).

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“… Data from Dobson et al (1993), Nedashkovskaya et al (2003, 2005a, b), Bowman et al (1998), Lau et al (2005a, b, 2006). …”

Section: Resultsmentioning

confidence: 99%

Section: Resultsmentioning

confidence: 99%

Section: Description Of Wangia Profunda Sp Novmentioning

confidence: 98%

Section: Description Of Wangia Profunda Sp Novmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

See 3 more Smart Citations

Wangia profunda gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment

Qin

Zhao

Wang

et al. 2007

FEMS Microbiology Letters

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Flavobacteriaceae

Bernardet¹

2015

Bergey's Manual of Systematics of Archaea and Bacteria

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Flavobacterium

Bernardet

Bowman

2015

Bergey's Manual of Systematics of Archaea and Bacteria

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Fla.vo.bac.te'ri.um. L. adj. flavus yellow; L. neut. n. bacterium a rod or staff and, in biology, a bacterium (so called because the first ones observed were rod‐shaped); N.L. neut. n. Flavobacterium a yellow bacterium. Bacteroidetes / Flavobacteriia / Flavobacteriales / Flavobacteriaceae / Flavobacterium Straight or slightly curved, single rods with rounded or slightly tapered ends typically about 0.3–0.5 µm in diameter and variable in length, often 2–5 µm; shorter (1 µm) or filamentous (10–40 µm) cells and pleomorphism also occur. The longer rods are flexible. Do not form endospores. Several species produce spherical degenerative forms (spheroplasts) in stationary growth phase. Nonmotile or motile by gliding. Flagella have not been reported. Colonies are pale to bright yellow due to the production of nondiffusible, nonfluorescent carotenoid or flexirubin types of pigments or both . Gram‐stain‐negative. Chemoorganotrophic. Most species are obligately aerobic, having a strictly respiratory type of metabolism with oxygen as the terminal electron acceptor. A few species may also grow weakly under microaerobic to anaerobic conditions. About half of the species are able to reduce nitrate to nitrite, but only one species is able to carry out complete denitrification . The optimum growth temperature range is 20–30°C for most temperate species and 15–20°C for most cold‐living species. Most species grow readily on nutrient and tryptic soy agars; no growth factors are required. Most species also grow on media containing up to 2–4% NaCl. Usually positive for catalase and oxidase . About half of the species are able to oxidize carbohydrates. Esculin and starch are hydrolyzed by most species, but agar and carboxymethylcellulose are hydrolyzed by only a few species. Strong proteolytic activity occurs. Menaquinone MK‐6 is the only or predominant respiratory quinone. Predominant cellular fatty acids are C 15:0 , C 15:0 iso, C 15:0 iso 3‐OH, C 15:0 anteiso, C 15:1 ω6 c , C 15:1 iso G , C 16:0 iso 3‐OH, and C 17:0 iso 3‐OH, as well as C 15:0 iso 2‐OH and/or C 16:1 ω7 c and/or C 16:1 ω7 t . Sphingophospholipids are absent in all tested species. Homospermidine is the major polyamine in all tested species. Occur in soil and in freshwater, marine, or saline environments in warm, temperate, or polar locations. Three species are pathogenic for freshwater fish and three others have occasionally been isolated from diseased freshwater fish. DNA G + C content ( mol %): 30–41. Type species : Flavobacterium aquatile (Frankland and Frankland 1889) Bergey, Harrison, Breed, Hammer and Huntoon 1923, 100 ( Bacillus aquatilis Frankland and Frankland 1889, 381) (not Flavobacterium antarcticum as erroneously printed in Bernardet and Bowman, 2006).

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Gramella portivictoriae sp. nov., a novel member of the family Flavobacteriaceae isolated from marine sediment

Cited by 35 publications

References 15 publications

Wangia profunda gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment

Wangia profunda gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae isolated from southern Okinawa Trough deep-sea sediment

Flavobacteriaceae

Flavobacterium

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