Hyperspectral proximal sensing of leaf chlorophyll content of spring maize based on a hybrid of physically based modelling and ensemble stacking

Huang, Xi; Guan, Huade; Bo, Liyuan; Xu, Zunqiu; Mao, Xiaomin

doi:10.1016/j.compag.2023.107745

Cited by 26 publications

(5 citation statements)

References 72 publications

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“…An increase in chlorophyll content indicates a higher level of leaf maturity and increased stability in leaf anatomy. Thus, within the range of 770-900 nm, the spectral reflectance increases with an increase in chlorophyll content, which aligns with the findings of previous studies [13,37,48]. Therefore, estimating the SPAD values of individual cotton leaves using hyperspectral data is feasible.…”

Section: Discussionsupporting

confidence: 88%

“…Therefore, chlorophyll content is used to measure the photosynthesis capacity, growth status, and status of environmental stress in crops [10,11]. Traditional methods for estimating chlorophyll content not only require destructive sampling but also involve cumbersome processes and long timelines, which are not conducive to large-scale applications [12,13]. The values determined by the soil plant analysis development (SPAD)-520 portable chlorophyll meter exhibit a highly significant correlation with the chlorophyll content of the crop.…”

Section: Introductionmentioning

confidence: 99%

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Hyperspectral Estimation of SPAD Value of Cotton Leaves under Verticillium Wilt Stress Based on GWO–ELM

Yuan,

Zhang,

Zhang

et al. 2023

Agriculture

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Rapid and non-destructive estimation of the chlorophyll content in cotton leaves is of great significance for the real-time monitoring of cotton growth under verticillium wilt (VW) stress. The spectral reflectance of healthy and VW cotton leaves was determined using hyperspectral technology, and the original spectra were processed using Savitzky–Golay (SG) smoothing, and on its basis through mean centering, standard normal variate (SG-SNV), multiplicative scatter correction (SG-MSC), reciprocal second-order differentiation, and logarithmic second-order differentiation ([lg(SG)]″) preprocessing operations. The characteristic bands were selected based on the correlation coefficient, vegetation index, successive projection algorithm (SPA), and competitive adaptive reweighted sampling (CARS). The single-factor model, back propagation neural network of particle swarm optimization algorithm, and extreme learning machine (ELM) of a grey wolf optimizer (GWO) algorithm were constructed to compare and explore the ability of each model to estimate the soil plant analysis development (SPAD) value of cotton under VW stress. The results showed that spectral pretreatment could improve the correlation between characteristic bands and SPAD values. SG-MSC and SG-SNV showed better changes in the five pretreatments, and the maximum correlation coefficients of healthy and VW cotton leaves were higher than 0.74. Compared with SPA, the accuracy of model estimation based on CARS-extracted characteristic bands was higher, and the estimation accuracy of the multi-factor model was better than that of the single-factor model under each pretreatment. For healthy cotton leaves, [lg(SG)]″–CARS–GWO–ELM was the optimal model, with a modeling and validation set R2 of 0.956 and 0.887, respectively. For VW cotton leaves, SG-MSC–CARS–GWO–ELM was the optimal model, with a modeling and validation set R2 of 0.832 and 0.824, respectively. Therefore, the GWO–ELM model constructed under different pretreatments combined with characteristic extraction methods can be used for the estimation of leaf SPAD values under VW stress to dynamically monitor VW stress in cotton and provide a theoretical reference for precision agriculture.

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Section: Discussionsupporting

confidence: 88%

Section: Introductionmentioning

confidence: 99%

Hyperspectral Estimation of SPAD Value of Cotton Leaves under Verticillium Wilt Stress Based on GWO–ELM

Yuan,

Zhang,

Zhang

et al. 2023

Agriculture

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“…In addition, previous studies have often focused on the estimation of SPAD values during the individual growth stages of crops. Compared to single-stage models, models capable of cross-growth stage estimation have higher practicality in agricultural production [68,69]. Surprisingly, the model established for wheat during the cross-growth stage achieved higher accuracy than the best model established during the green-up stage, although slightly lower than the best model established during the jointing stage.…”

Section: The Optimal Inversion Modelsmentioning

confidence: 95%

Estimation of Winter Wheat SPAD Values Based on UAV Multispectral Remote Sensing

Yin

Zhang

et al. 2023

Remote Sensing

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Unmanned aerial vehicle (UAV) multispectral imagery has been applied in the remote sensing of wheat SPAD (Soil and Plant Analyzer Development) values. However, existing research has yet to consider the influence of different growth stages and UAV flight altitudes on the accuracy of SPAD estimation. This study aims to optimize UAV flight strategies and incorporate multiple feature selection techniques and machine learning algorithms to enhance the accuracy of the SPAD value estimation of different wheat varieties across growth stages. This study sets two flight altitudes (20 and 40 m). Multispectral images were collected for four winter wheat varieties during the green-up and jointing stages. Three feature selection methods (Pearson, recursive feature elimination (RFE), and correlation-based feature selection (CFS)) and four machine learning regression models (elastic net, random forest (RF), backpropagation neural network (BPNN), and extreme gradient boosting (XGBoost)) were combined to construct SPAD value estimation models for individual growth stages as well as across growth stages. The CFS-RF (40 m) model achieved satisfactory results (green-up stage: R2 = 0.7270, RPD = 2.0672, RMSE = 1.1835, RRMSE = 0.0259; jointing stage: R2 = 0.8092, RPD = 2.3698, RMSE = 2.3650, RRMSE = 0.0487). For cross-growth stage modeling, the optimal prediction results for SPAD values were achieved at a flight altitude of 40 m using the Pearson-XGBoost model (R2 = 0.8069, RPD = 2.3135, RMSE = 2.0911, RRMSE = 0.0442). These demonstrate that the flight altitude of UAVs significantly impacts the estimation accuracy, and the flight altitude of 40 m (with a spatial resolution of 2.12 cm) achieves better SPAD value estimation than that of 20 m (with a spatial resolution of 1.06 cm). This study also showed that the optimal combination of feature selection methods and machine learning algorithms can more accurately estimate winter wheat SPAD values. In addition, this study includes multiple winter wheat varieties, enhancing the generalizability of the research results and facilitating future real-time and rapid monitoring of winter wheat growth.

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“…Therefore, many studies utilized feature selection to improve predictive modeling performance, and they can be divided into three categories: filter, wrapper, and embedded [27,28]. For embedding algorithms, variable selection is embedded into the model training process, and is achieved by determining high-importance score contributed to the model, such as LASSO [29], variable importance in projection based on partial least squares (PLS-VIP) [30] and various regression trees [31,32]. The filter-based algorithm, such as Pearson correlation coefficient thresholding, is most commonly used due to its simplicity.…”

Section: Introductionmentioning

confidence: 99%

Estimation of the Bio-Parameters of Winter Wheat by Combining Feature Selection with Machine Learning Using Multi-Temporal Unmanned Aerial Vehicle Multispectral Images

Zhang,

Yi,

Wang

et al. 2024

Remote Sensing

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Accurate and timely monitoring of biochemical and biophysical traits associated with crop growth is essential for indicating crop growth status and yield prediction for precise field management. This study evaluated the application of three combinations of feature selection and machine learning regression techniques based on unmanned aerial vehicle (UAV) multispectral images for estimating the bio-parameters, including leaf area index (LAI), leaf chlorophyll content (LCC), and canopy chlorophyll content (CCC), at key growth stages of winter wheat. The performance of Support Vector Regression (SVR) in combination with Sequential Forward Selection (SFS) for the bio-parameters estimation was compared with that of Least Absolute Shrinkage and Selection Operator (LASSO) regression and Random Forest (RF) regression with internal feature selectors. A consumer-grade multispectral UAV was used to conduct four flight campaigns over a split-plot experimental field with various nitrogen fertilizer treatments during a growing season of winter wheat. Eighteen spectral variables were used as the input candidates for analyses against the three bio-parameters at four growth stages. Compared to LASSO and RF internal feature selectors, the SFS algorithm selects the least input variables for each crop bio-parameter model, which can reduce data redundancy while improving model efficiency. The results of the SFS-SVR method show better accuracy and robustness in predicting winter wheat bio-parameter traits during the four growth stages. The regression model developed based on SFS-SVR for LAI, LCC, and CCC, had the best predictive accuracy in terms of coefficients of determination (R2), root mean square error (RMSE) and relative predictive deviation (RPD) of 0.967, 0.225 and 4.905 at the early filling stage, 0.912, 2.711 μg/cm2 and 2.872 at the heading stage, and 0.968, 0.147 g/m2 and 5.279 at the booting stage, respectively. Furthermore, the spatial distributions in the retrieved winter wheat bio-parameter maps accurately depicted the application of the fertilization treatments across the experimental field, and further statistical analysis revealed the variations in the bio-parameters and yield under different nitrogen fertilization treatments. This study provides a reference for monitoring and estimating winter wheat bio-parameters based on UAV multispectral imagery during specific crop phenology periods.

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Hyperspectral proximal sensing of leaf chlorophyll content of spring maize based on a hybrid of physically based modelling and ensemble stacking

Cited by 26 publications

References 72 publications

Hyperspectral Estimation of SPAD Value of Cotton Leaves under Verticillium Wilt Stress Based on GWO–ELM

Hyperspectral Estimation of SPAD Value of Cotton Leaves under Verticillium Wilt Stress Based on GWO–ELM

Estimation of Winter Wheat SPAD Values Based on UAV Multispectral Remote Sensing

Estimation of the Bio-Parameters of Winter Wheat by Combining Feature Selection with Machine Learning Using Multi-Temporal Unmanned Aerial Vehicle Multispectral Images

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