The leaf anatomy of nine species of Manihot Mill. has been studied with the objective of finding anatomical features that contribute to our understanding of the taxonomy of the genus. Leaf samples were collected in the field and from herbarium specimens, and standardized methods were used for both light and scanning electron microscopy (SEM). The following species were studied: M. bellidifolia P. Carvalho & M. Martins, M. brachyandra Pax & K. Hoffm., M. caerulescens Pohl, M. diamantinensis Allem, M. elongata sp. nov. ined., M. jacobinensis Müll. Arg. (I), M. jacobinensis Müll. Arg. (II), M. longiracemosa P. Carvalho & M. Martins, M. maracasensis Ule, M. reniformis Pohl, M. tripartita (Spreng) Müll. Arg. and Manihot sp. Anatomically, the analysis revealed differences that indicate the importance of leaf anatomy in the species‐level taxonomy. Presence of fibers in the bundle sheath, and presence or absence of papillae and fibers in the midrib are diagnostic characters. Although these characteristics were not enough to separate all of the species, or to group them into a section, they did show taxonomic importance at the species level. In addition, morphoanatomical differences and geographical distribution support Manihot sp. as a distinct species.