“…We compared this list of SOX2 targets with our list of SOX2 and AP1 co-bound genes, to determine if they were regulated by SOX2/AP1 interplay, and we found that a consistent number of them displayed concomitant binding events of SOX2 and AP1 in their genomic loci. Among these, notable examples are Btg2 [ 24 , 25 , 26 ], Lrp4 [ 27 ], Map1b [ 28 , 29 , 30 ], Tmem 108 [ 31 , 32 ], Nkx2-2 [ 33 , 34 , 35 ], Wnt3 [ 36 ], Gli2 [ 37 ], Egr2/Egr [ 38 ], Plxnb3 [ 39 ], Gbx2 [ 40 ], Gsx1 [ 41 , 42 ], Jun [ 43 ], Tenm4 [ 44 ] (some of them are shown as example in Figure 5 B). Strikingly, when these 340 downregulated genes were analyzed using the STRING database, which matches functional interactions across protein networks by unbiased literature mining [ 45 ], we uncovered a SOX2/AP1-centered regulatory network composed of neuronal players ( Figure 6 B,C and Figure S4; Table S6 ).…”