Arylalkylamine N‐acetyltransferase (aaNAT) catalyzes the acetylation of dopamine, 5‐hydroxy‐tryptamine, tryptamine, octopamine, norepinephrine and other arylalkylamines to form respective N‐acetyl‐arylalkylamines. Depending on the products formed, aaNATs are involved in a variety of physiological functions. In the yellow fever mosquito, Aedes aegypti, a number of aaNATs and aaNAT‐like proteins have been reported. However, the primary function of each individual aaNAT is yet to be identified. In this study we investigated the function of Ae. aegypti aaNAT1 (Ae‐aaNAT1) in cuticle pigmentation and development of morphology. Ae‐aaNAT1 transcripts were detected at all stages of development with highest expressions after pupation and right before adult eclosion. Ae‐aaNAT1 mutant mosquitoes generated using clustered regularly interspaced palindromic repeats (CRISPR) – CRISPR‐associated protein 9 had no obvious effect on larval and pupal development. However, the mutant mosquitoes exhibited a roughened exoskeletal surface, darker cuticles, and color pattern changes suggesting that Ae‐aaNAT1 plays a role in development of the morphology and pigmentation of Ae. aegypti adult cuticles. The mutant also showed less blood feeding efficiency and lower fecundity when compared with the wild‐type. The mutation of Ae‐aaNAT1 influenced expression of genes involved in cuticle formation. In summary, Ae‐aaNAT1 mainly functions on cuticular pigmentation and also affects blood feeding efficiency and fecundity.