This study presents auxiliary support techniques for tree selection strategies based on the spatial structure indices and three competition indices in secondary forests, and discusses the importance of tree competition in forest management. The spatial structure parameter in the structured management is used as a quantitative index—the uniform angle index and three competition indices are used in the design of the algorithm for selective thinning for secondary forest. Based on the target tree-based management principles, simulation of selective thinning was carried out using GIS and C# programming languages. Data for this study were collected from experimental sample plots at Jilin Wangqing Forestry Bureau in China. The simulation results strongly support the use of auxiliary technology for scientifically selecting trees for thinning, avoiding the subjectivity of the traditional manual selection. Selection is largely based on the uniform angle index and competition index. Hegyi’s competition index and its improved version used in the algorithm provided almost identical simulation results, i.e., thinning intensities suggested by these indices for the first sample plot are 21.8% and 21.5%, respectively, and for the second plot are 21.3% and 21.1%, respectively. Thus, one of these competition indices can be used to select trees for thinning. The comprehensive competition index (CCI, a combination of an improved version of Hegyi’s competition index with tree species mingling) can avoid the selection of individual trees with high mingling and help maintain the tree species diversity. CCI suggests thinning intensities of 18.3% and 18.4% for the first and second sample plots, respectively. Presented methods and results may provide auxiliary supports for scientific thinning and help promote the application of information technology in forest management.