The malaria parasite, Plasmodium falciparum, spends part of its life cycle inside the erythrocytes of its human host. In the mature stages of intraerythrocytic growth, the parasite undertakes extensive remodeling of its adopted cellular home by exporting proteins beyond the confines of its own plasma membrane. To examine the signals involved in export of parasite proteins, we have prepared transfected parasites expressing a chimeric protein comprising the N-terminal region of the Plasmodium falciparum exported protein-1 appended to green fluorescent protein. The majority of the population of the chimeric protein appears to be correctly processed and trafficked to the parasitophorous vacuole, indicating that this is the default destination for protein secretion. Some of the protein is redirected to the parasite food vacuole and further degraded. Photobleaching studies reveal that the parasitophorous vacuole contains subcompartments that are only partially interconnected. Dual labeling with the lipid probe, BODIPY-TR-ceramide, reveals the presence of membrane-bound extensions that can bleb from the parasitophorous vacuole to produce double membranebound compartments. We also observed regions and extensions of the parasitophorous vacuole, where there is segregation of the lumenal chimera from the lipid components. These regions may represent sites for the sorting of proteins destined for the trafficking to sites beyond the parasitophorous vacuole membrane.Due to the compartmentalization of eukaryotic cells, a sophisticated protein trafficking system is an integral requirement for homeostasis and growth. Proteins destined for compartments other than the cytoplasm are synthesized with intrinsic signals that determine their transport within the cell. Small peptide motifs often form the necessary targeting determinants (1). For example, an N-terminal hydrophobic sequence forms part of the typical secretory signal that directs proteins across the endoplasmic reticulum (ER) 1 membrane (2-5). Similarly, N-terminal amphipathic and bipartite sequences target proteins to the chloroplast and mitochondria (6 -8).The malaria parasite, Plasmodium falciparum, spends part of its life cycle inside mature human erythrocytes. The parasite invades this quiescent host cell and develops within a parasitophorous vacuole (PV). An unusual and highly specialized secretory system enables the malaria parasite to survive within a cell that lacks its own machinery for protein synthesis and trafficking. Indeed, the parasite targets proteins, not only to compartments within its own confines, but to the PV, in which it resides, as well as the PV membrane (PVM), the erythrocyte cytoplasm, and host cell membrane (9 -11).Efforts have been made to understand the trafficking signals that target parasite proteins to different compartments within and outside the parasite. Proteins destined for the ER, the parasite plasma membrane (PPM), the PV, or the PVM appear to have a "classical" hydrophobic N-terminal signal sequence (i.e. a stretch of 10 -15 hydrop...