Outbreaks of bloody diarrhea in swine herds in the late 2000s signaled the reemergence of an economically significant disease, swine dysentery, in the United States. Investigations confirmed the emergence of a novel spirochete in swine, provisionally designated "Brachyspira hampsonii," with two genetically distinct clades. Although it has since been detected in swine and migratory birds in Europe and North America, little is known about its genetic diversity or its relationships with other Brachyspira species. This study characterizes B. hampsonii using a newly developed multilocus sequence typing (MLST) approach and elucidates the diversity, distribution, population structure, and genetic relationships of this pathogen from diverse epidemiological sources globally. Genetic characterization of 81 B. hampsonii isolates, originating from six countries, with our newly established MLST scheme identified a total of 20 sequence types (STs) belonging to three clonal complexes (CCs). B. hampsonii showed a heterogeneous population structure with evidence of microevolution locally in swine production systems, while its clustering patterns showed associations with its epidemiological origins (country, swine production system, and host species). The close genetic relatedness of B. hampsonii isolates from different countries and host species highlights the importance of strict biosecurity control measures. A comparative analysis of 430 isolates representing seven Brachyspira species (pathogens and commensals) from 19 countries and 10 host species depicted clustering by microbial species. It revealed the close genetic relatedness of B. hampsonii with commensal Brachyspira species and also provided support for the two clades of B. hampsonii to be considered a single species.
Outbreaks of bloody mucoid diarrhea were reported in North American swine herds in the late 2000s. This diarrheal condition was accompanied by inappetance, weight loss/reduced weight gain, and reduced feed conversion efficiency, all suggesting the reemergence of swine dysentery (1). Swine dysentery is a mucohemorrhagic diarrheal disease that until recently was known to be caused by an anaerobic spirochete Brachyspira hyodysenteriae, which predominantly affects the cecum and colon of grower-finisher pigs. The disease has caused major economic losses to swineproducing countries globally due to production losses (associated with morbidity and mortality) and the cost of treatment and control of the disease (2). In 2007, a mucohemorrhagic diarrheal disease similar to swine dysentery and caused by a novel pathogen "Brachyspira suanatina" was reported in swine and mallards in Sweden and Denmark (3). Since then, B. suanatina has not been identified in other countries (4), and consequently B. hyodysenteriae has continued to be the main pathogen of interest to swine producers and diagnostic laboratories across the world for finisher pigs with clinical signs of mucohemorrhagic diarrhea.Although widely prevalent until the late 1980s, swine dysentery has been rarely re...