DNA from newborn mice was digested with restriction endonuclease EcoRI, and a 6.6-kilobase fragment encoding immunoglobulin 'y2b chain mRNA derived from MPC 11 myeloma was enriched about 100-fold by RPC-5 column chromatography and agarose gel electrophoresis. The 6.6-kilobase fragment was Immunoglobulin heavy chain genes consist of a family of variable region (V) genes and several constant region (C) genes. V and C genes are genetically linked and expressed as a cis combination (1-3). In a given lymphocyte, immunoglobulin genes on one allele are exclusively expressed (4-6). Recently, we have shown that specific C genes are deleted from one allele in mouse myelomas depending on which C genes are expressed (7,8). We have proposed an allelic deletion model as the mechanism of the V-C gene recombination that results in the expression of the specific immunoglobulin genes (7,8 two or more neighboring genes. For this purpose it is essential to clone two putative adjacent y chain genes. In this paper we will describe cloning of the -y2b chain C gene, which is proposed to be adjacent to the y1 chain gene, and its structure. EXPERIMENTAL PROCEDURES Partial Purification of DNA Fragment. High molecular weight DNA was extracted from whole newborn mice (killed within 24 hr after birth). DNA was digested with EcoRI, extracted with phenol, and precipitated with ethanol. Forty milligrams of EcoRI-digested DNA was chromatographed on an RPC-5 column (0.8 X 90 cm) as described (10,12). Fractions that hybridized with the y2b chain cDNA by in situ hybridization were pooled and concentrated by ethanol precipitation. The DNA obtained was applied to a 1% agarose gel (7 X 15 X 4 cm) and fractionated as described (13). Fractions were assayed by in situ hybridization with nick-translated y2b chain [32P]cDNA cloned in a plasmid (pG2b-4).Preparation and Screening of Recombinant Phage. Bacteriophage XgtWES-XB (9) was used as the EK2 vector and propagated in ED8656 (14). Cloning experiments were carried out in a P2 facility (15, 16). Bacterial strains NS428 [N205 (X Aamll b2 red 3 cI857 Sam7)I (17) and Xdg8O5 [W3350 (Xdgal8O5 cl857 Sam7)] were used for in vitro packaging.Partially purified 6.6-kilobase (kb) mouse DNA (2 jig) was ligated with 5.1 ,ug of XgtWES outer fragments in a 50-,ul reaction mixture with 0.6 unit of T4 ligase as described (18). The recombinant DNA was packed into coat proteins in vitro and the recombinant phages were plated by the method of Blattner et al. (19). Twenty sets of about 2000 plaques were directly transferred from LB broth agar plates to Millipore filters as described (20). The Millipore filters were hybridized to 32p-labeled Hha I fragment of pG2b-4 and autoradiographed. Recombinant phage DNA was prepared as described (18).In Situ Hybridization. DNA, fixed on a Millipore filter (21), was hybridized to an appropriate probe as described by Jeffrey and Flavell (22) except that 1 M NaCl/50 mM Tris-HCI, pH 7.4/10 mM EDTA replaced 0.9 M NaCl/0.09 M sodium citrate.The probes used were [32P]cDNA (specific ac...