Phase angle (PA) is a strong predictor of sarcopenia, fragility, and risk of mortality in obese people, while an optimal muscular function and handgrip strength (HS) are required to perform different daily activities. Although there is a general agreement that resistance training improves health status in obese people, the optimal weekly training frequency for PA and physical performance parameters is not clear. This study aimed to compare the effects of different weekly resistance training frequencies performed over a 24 week exercise program on PA and HS in obese people. Forty-two women (56.2 ± 9.1 years, body mass index (BMI) 37.1 ± 4.9 kg/m2) were randomly allocated to one of two groups: a group with a high weekly training frequency of three times a week (HIGH, n = 21) and a group that performed only one weekly session (LOW, n = 21). The groups trained with an identical exercise intensity and volume per session for 6 months. Before and after the intervention period, the participants were assessed for anthropometric measures, bioimpedance analysis, and HS. There was a significant group × time interaction (p < 0.05) for waist circumference, bioimpedance reactance divided by body height (Xc/H), PA, and HS measures. In addition, only the HIGH group increased Xc/H, PA, and HS after the intervention period (p < 0.05), even after adjusting for weight loss and menopausal status. Physical exercise performed three times a week promotes better adaptations in PA and HS when compared with the same program performed once a week in obese women.