We previously generated a ceftobiprole-resistant Staphylococcus aureus strain after high inoculum serial passage of a mecA-negative variant of strain COL (R. Banerjee, M. Gretes, L. Basuino, N. Strynadka, and H. F. Chambers, Antimicrob. Agents Chemother. 52: [2089][2090][2091][2092][2093][2094][2095][2096] 2008). Genome resequencing of this strain, CRB, revealed that it differs from its parent by five single-nucleotide polymorphisms in three genes, specifically, those encoding PBP4, a low-molecular-weight penicillin-binding protein, GdpP, a predicted signaling protein, and AcrB, a cation multidrug efflux transporter. CRB displayed resistance to a variety of -lactams but was hypersusceptible to cefoxitin.The efficacy of antimicrobials currently used to treat methicillin-resistant Staphylococcus aureus (MRSA) is decreasing (2,7,12,20,26). Novel, investigational -lactams with activity against MRSA, including ceftobiprole and ceftaroline, are in clinical development and bind with high affinity to staphylococcal PBP2a, the penicillin-binding-protein encoded by the gene mecA (5,6,18,22). Widespread clinical use of these newer cephalosporin antibiotics will likely generate organisms resistant to them.Our laboratory previously reported the emergence of ceftobiprole-resistant MRSA in vitro (1). We demonstrated that serial passage of MRSA strain COL in subinhibitory ceftobiprole concentrations selected for point mutations in mecA that conferred resistance to ceftobiprole and other -lactams. This is not surprising, given that ceftobiprole's anti-MRSA activity is due to its ability to bind to the active site of all PBPs, including that of PBP2a. However, an unexpected result was that passage of a mecA-negative COL variant (COLnex) also selected for high level -lactam resistance in a derivative, named CRB (1). We undertook genome resequencing of strain CRB to identify the molecular basis for mecA-independent resistance to -lactams.Strain COLnex (a tetracycline-and methicillin-susceptible, -lactamase negative variant of COL) lacks chromosomal mecA, which had been eliminated by complete excision of the SCCmec cassette element and selection for loss of methicillin resistance (14). COLnex was transformed with a plasmid vector, pAW8, and serially passaged in increasing concentrations of ceftobiprole and 10 g/ml of tetracycline as previously described (1). A resistant mutant, CRB, was selected after 21 days of serial passage in ceftobiprole; MICs increased from 1 for the COL parent to 256 g/ml for mutant strain CRB.CRB displayed reduced growth rate and colonies that are smaller, less hemolytic, and less pigmented than those of the parent strain. These multiple phenotypic abnormalities suggest that CRB has alterations of global gene expression and/or cell signaling pathways. Scanning electron microscopy of CRB and COLnex in the presence and absence of -lactam did not reveal any gross ultrastructural differences between the strains. CRB also displayed high-level resistance to all -lactams tested but demonstrated hypersensiti...