O riental theileriosis is an economically important tick-borne disease of bovines, particularly in the Asia-Pacific region, and is caused by one or more genotypes of the Theileria orientalis complex (1, 2). Based on sequence analysis of the major piroplasm surface protein (MPSP) gene, at least 11 genotypes have been defined for T. orientalis (1); five of them (i.e., Buffeli, Chitose, Ikeda, and types 4 and 5) have been reported from Australia (3, 4). Previously, high infection intensities of the pathogenic genotypes Ikeda and Chitose have been linked to the clinical cases of oriental theileriosis in Australia and New Zealand (5-7); hence, it is important to estimate the burden of different genotypes of T. orientalis. To detect, differentiate, or quantitate these genotypes, three molecular diagnostic techniques, including conventional PCR (4), quantitative PCR using TaqMan probes (5, 6), and multiplexed tandem PCR (MT-PCR) (7), have been utilized. Although a previously developed multiplexed tandem PCR (MT-PCR) for the detection, differentiation, and quantitation of four genotypes (Buffeli, Chitose, Ikeda, and type 5) of T. orientalis was sensitive, cost-effective, and time-effective (7), the direct comparison of the intensities of infection for different genotypes was challenging using the assay due to the use of multiple markers (i.e., the MPSP gene for Chitose and type 5, the p23 gene for Buffeli, and ITS-1 for Ikeda) with variable copy numbers per genome of T. orientalis (8). Furthermore, cross-reactivity was detected between genotypes Buffeli and Ikeda (using the p23 gene) when samples originating from other geographical regions such as Ethiopia and Pakistan were tested by MT-PCR (8). The objective of this study was to modify the existing MT-PCR assay to detect, differentiate, and quantitate the four common genotypes of T. orientalis (Buffeli, Chitose, Ikeda, and type 5) using the MPSP marker. A total of 175 DNA samples (known test positives [n ϭ 50] and known test negatives [n ϭ 125] by conventional PCR and DNA sequencing) extracted from cattle blood samples were available from previous studies (9, 10). The 50 test-positive-control samples were positive for at least one of the four genotypes of T. orientalis (Buffeli, Chitose, Ikeda, and type 5) (9, 10). The assay was conducted in the 24-well variant of the Easy-Plex platform, including the 96-well Easy-Plex Analyzer and PC with Easy-Plex software (catalog no. 9350; AusDiagnostics Pty. Ltd., Australia). The primary amplification ("target enrichment") was conducted using genotype-specific primer pairs designed to the sequences of the MPSP gene for genotypes Buffeli, Chitose, Ikeda, and type 5 and the first internal transcribed spacer (ITS-1) for all Theileria spp. infecting bovines (Step 1 tubes for Theileria [8 well], catalog no. 78171S; AusDiagnostics). The secondary amplification for