D-Aspartic acid is abundant in the developing brain. We have identified and cloned mammalian aspartate racemase (DR), which converts Laspartate to D-aspartate and colocalizes with D-aspartate in the brain and neuroendocrine tissues. Depletion of DR by retrovirus-mediated expression of short-hairpin RNA in newborn neurons of the adult hippocampus elicits profound defects in the dendritic development and survival of newborn neurons and survival. Because D-aspartate is a potential endogenous ligand for NMDA receptors, the loss of which elicits a phenotype resembling DR depletion, D-aspartate may function as a modulator of adult neurogenesis.neuronal development | neural progenitor cells | hippocampus | NMDA receptor | neuroendocrine D -amino acids are being increasingly recognized as putative neurotransmitters. D-serine, an endogenous ligand for the glutamate-NMDA receptor, is formed by serine racemase, a pyridoxal 5ā²-phosphate (PLP)-dependent enzyme that converts L-serine to D-serine (1). Deletion of serine racemase alters NMDA receptor neurotransmission and long-term potentiation (2-4), and its disturbance has been implicated in schizophrenia (5-7). D-aspartate is present in selected neuronal populations in the brain as well as in neuroendocrine tissues, such as the catecholaminergic cells of the adrenal medulla, the anterior/posterior lobes of the pituitary gland, the pineal gland, and the testes (8-10). In early neonatal stages, high D-aspartate densities in the cortical plate, subventricular zone, and discrete portions of the hippocampal formation imply a developmental role (11). In adult hippocampus, D-aspartate persists in dentate gyrus, where new neurons are generated throughout life (12, 13). These newborn neurons are integrated into existing neural circuitry and are involved in learning and memory formation (12, 13). Insight into specific neural functions for D-aspartate has been hampered by ignorance of its biosynthesis. In the present study, we identify and clone mammalian aspartate racemase (DR), which converts L-aspartate to D-aspartate. Deletion of DR leads to pronounced defects in adult hippocampal neurogenesis, implicating D-aspartate as a major regulator of neuronal development.
Results and DiscussionCloning and Characterization of DR. In a genomic sequence analysis, we were unable to find candidate mammalian DR genes based on homology to serine racemase or bacterial aspartate racemases, which are either PLP-independent or PLP-dependent enzymes (14, 15). Vacca and coworkers (16-18) demonstrated that glutamate-oxalacetate transaminase (GOT) can generate small amounts of D-aspartate in the process of transaminating Laspartate to L-glutamate, and that formation of D-aspartate is augmented in GOT mutants, wherein histidine replaces tryptophan-140 and lysine replaces arginine-292. Tryptophan-140 normally prevents access of a proton donor, such as a water molecule, which can effectuate racemization (Fig. 1A); however, replacement of tryptophan-140 by histidine allows direct protonation by histidine for ...