E .A . M O MO L, T .J . B U RR , C . L. RE I D, M. T . M OM O L, S. H . H SE U AN D L . OT TE N . 1998. Sixty-nine strains of Agrobacterium vitis, the causal agent of grape crown gall, originating from different geographical regions of the USA and Europe, were characterized by fingerprint analysis of the 5?-end of the 23S rRNA gene and by Random Amplified Polymorphic DNA (RAPD) markers. For 5?-end 23S fingerprinting, amplicons were digested with TaqI, RsaI, AvaI, CfoI and AluI. For RAPD analysis, three 10-mer primers were used to generate PCR products. There was a high degree of correlation between strain groupings generated by the two methods. However, more diversity was identified when groupings were based on RAPDs. For example, 28 of 29 strains having nopaline type Ti plasmids generated identical 5?-end 23S patterns but formed two distinct RAPD groups that separated strains originating from the USA and Hungary. Similarly by RAPDs, one cluster of strains carrying vitopine-type Ti plasmids could be separated into those originating in the USA and Europe. The composition of strain groups generated by 5?-end 23S and RAPDs were highly correlated with a previous fingerprint analysis of the intergenic spacer region (located between the 16S and 23S rRNA genes) and with RFLP analysis for characterizing Ti plasmids. These findings show that among Ag. vitis strains there is a high level of correlation between two regions of the rRNA operon, total genomic DNA (as determined by RAPDs) and the type of Ti plasmid they carry.
INTRODUCTIONCrown gall caused by Agrobacterium vitis (Ophel and Kerr 1990) is a serious disease of grapes worldwide, particularly on cultivars of Vitis vinifera. The bacterium survives systemically in vines and in addition to tumours, it causes tissue necrosis that is associated with production of a chromosomally-encoded polygalacturonase (McGuire et al. 1991;Rodriguez-Palenzuela et al. 1991;Herlache et al. 1997). Tumours usually develop on the lower trunks of vines near graft unions. Grapevines carrying Ag. vitis systemically may form galls when chemical signals from wounded plants induce the infection process by the pathogen (Burr et al. 1987). Tumorigenic and non-tumorigenic strains of Ag. vitis coexist in galls and symptomless tissues and may be disseminated in propagation material Katz 1983, 1984).Correspondence to : Dr E. A. Momol, Department of Plant Pathology, Cornell University, Geneva, NY 14456, USA (e-mail: eam17@cornell.edu).
© 1998 The Society for Applied MicrobiologyTumorigenic strains of Ag. vitis have been previously characterized based on the types of opine synthesis and catabolic genes they carry on their Ti plasmids. Important characteristics of Ti plasmids are the genetic make-up of the T-DNA that is transferred and expressed in plants, the virulence genes that are responsible for packaging and transport of T-DNA, and the genes coding for opine synthesis and catabolism. Ti plasmids differ structurally and are generally divided into those that encode the synthesis of nopaline (contai...