Abstract. Intra-annual variations of δ 13 C and δ 15 N of watercolumn suspended particulate organic matter (SPOM) have been investigated to understand the biogeochemical cycling of C and N in the Western Continental Shelf of India (WCSI). The key issues being addressed are: how the δ 15 N of SPOM is affected by seasonally varying processes of organic matter production and respiration and how it relates to the δ 15 N of sedimentary organic matter that appears to show a decreasing trend despite an apparent intensification of seasonal oxygen deficiency over the past few decades? A secondary objective was to evaluate the sources of organic carbon. Elemental carbon and nitrogen concentrations, C/N ratios in SPOM, along with ancillary chemical and biological variables including phytoplankton pigment abundance were also determined on a seasonal basis (from March 2007 to September 2008), with the partial exception of the southwest (SW) monsoon period. The results reveal significant shifts in isotopic signatures, especially δ 15 N, of SPOM before and after the onset of SW monsoon. Very low δ 15 N values, reaching a minimum of −4.17 ‰, are found during the pre-monsoon period. Our results provide the first direct evidence for the addition of substantial amounts of isotopically light nitrogen by the diazotrophs, especially Trichodesmium, in the region. The δ 15 N of SPOM is generally lower than the mean value (7.38 ‰) for surficial sediments, presumably because of diagenetic enrichment. The results support the view that sedimentary δ 15 N may not necessarily reflect denitrification intensity in the overlying waters due to diverse sources of nitrogen and variability of its isotopic composition. The observed intra-annual variability of δ 13 C of SPOM during the pre-monsoon and post-monsoon periods is generally small. Phytoplankton production and probably species composition could drive some of the observed changes. The largest changes (depletion of Correspondence to: M. V. Maya (mmayae11@gmail.com) δ 13 C and increase in C/N) appear to occur during the preand post-monsoon seasons, presumably through episodic deposition of terrestrial organic matter from the atmosphere. During the SW monsoon, when a large input of terrestrial organic matter is expected through runoff from land, the C/N ratio remains low, but significant difference is observed between δ 13 C data in 2007 and 2008. Inputs of soil organic matter that may have elemental and isotopic signatures different from those of the conventional (C 3 plant derived) organic matter could explain the constancy of the C/N ratio.