Many
organic compounds can exist in hydrated and anhydrous crystalline
forms, each of which exhibits its own different set of physical properties.
This makes dehydration–rehydration processes an important class
of solid-state reactions; yet, the molecular-level mechanisms and
cooperative motions which govern such transformation in molecular
solids have been notoriously difficult to establish. Here using time-resolved
synchrotron X-ray powder diffraction (sPXRD) and other methods, we
identify a number of early subtle changes in thymine hydrate (TH)
which set its trajectory for the formation of anhydrous products.
An early cooperative “morning stretch” motion, characterized
by a coordinated increase in the interlayer separation and angular
rotation, was observed prior to the appearance of the first major
anhydrous phase, Td1. Kinetic analyses indicated the overall
solid-state reaction proceeds via a one-dimensional diffusion mechanism
with an E
a = 115–122 kJ/mol. At
temperatures ≥45 °C, solid state dehydration yielded mixtures
of Td1 and a second major anhydrous phase, Td2. Multiphase refinement of sPXRD data proved that Td2 is
formed via two distinct routeseither directly due to water
loss from TH or via the polymorphic transformation of Td1. Heating above ∼180 °C yielded Td2 as the
major product. A limited number of weak diffraction peaks evidence
the presence of a third transient form, Td*, which also converts to
Td2. The time-resolved methods used here illustrate that
solid-state dehydration even in a seemingly simple molecular hydrate
system involves a significantly more complex set of coordinated molecular
motions and solid–solid transformations than originally thought.
The ability to glean a more complete picture of the cooperative motions
that occur during water loss from soft crystalline hydrates is an
important step in the development of a deeper understanding of this
important class of materials.