The complete amino acid sequence of Rhodoferax fermentans high-potential iron-sulfur protein (Hipip), which is known to be an efficient electron donor to the photosynthetic reaction center, has been determined using both N-terminal and C-terminal analyses. The sequence contains 75 residues, with 11 positive charges, 10 negative charges, and one histidine residue. The molecular mass of apo-Hipip, determined by electrospray ionization mass spectrometry, is 7849.64 Da. Multiple sequence alignment, based both on primary and tertiary structure information, reveals conservation of Tyrl9 and Gly75 ( Chromatium vinosum numbering) in addition to the four [Fe,S,]-bound cysteines. The Hipip from RJ fermentans is most similar (57 % similarity) to the Hipip from Rubrivivax gelatinosus, a photosynthetic bacterium belonging to the p-1 subgroup of the proteobacteria.Keywords: High-potential iron-sulfur protein ; Rhodoferax fermentans ; amino acid sequence ; mass spectrometry.Rhodoferax fermentans is a non-sulfur purple phototrophic bacterium belonging to the p group of phototrophic bacteria [ 1 -31. Sequence analyses of the 16s rDNA gene has shown that this bacterium is closely related to members of the chemotrophic family of the Comamonadaceae and less closely related to Rubrivivax gelatinosus (formerly called Rhodocyclus gelatinosus) [4], a non-sulfur purple bacterium, and to species of the genus Rhodocyclus.Light-grown cells of R$ fermentans contain one soluble ctype, four membrane-bound c-type, and three b-type haem proteins. Dark-grown cells, however, contain three membranebound c-type and four b-type haem proteins [5]. It has been shown that the membrane-bound c-type haem proteins from light-grown cells are able to reduce the photo-oxidized photosynthetic reaction center (RC) [6].A high reduction potential soluble protein, present in light grown cells of RJ fermentans in larger amounts than the soluble cytochrome c, was shown to be an iron-sulfur protein (Hipip) by means of a variety of spectroscopic techniques [7, 81. Hipips are small-sized redox proteins that, in contrast to the low potential [4Fe-4S] ferredoxins, are characterized by reduction potentials in the range +50 to +450 mV [9, 101 and by [Fe4S413+''+ redox states [ll]. Experiments of light-induced oxidation of RC and membrane-bound c-type haem proteins have shown that RJ: fermentans Hipip is able to rapidly reduce the photo-oxidized photosynthetic RC through the reduction of the membranebound c-556 haem [7, 121. This process follows multiphasic kinetics, with a fast phase occumng within a HipiplRC complex [13]. The high value of this electron transfer rate (t,,* = 2.2 ps) suggests a physiological role for Hipip in photocyclic electron transfer [13]. Recent evidence pointing to a physiological role for Hipips has also been established in Ru. gelatinosus whole cells [14]. Other functions, however, cannot be ruled out [ I 5 5 201. To deepen our understanding of the function of R& fermentans Hipip, to put the data obtained by NMR spectroscopy into focus [8], an...