The COVID-19 pandemic, caused by
the fast transmission and spread
of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is
currently considered a serious health problem, requiring an effective
strategy to contain SARS-CoV-2 dissemination. For this purpose, epitopes
of the SARS-CoV-2 spike (S) and sucleocapsid (N) proteins were identified
by bioinformatics tools, and peptides that mimic these epitopes were
chemically synthesized and then conjugated to superparamagnetic nanoparticles
(SPMNPs). Three peptides from S protein and three from N protein were
used as antigens in a conventional enzyme-linked immunosorbent assay
(ELISA) against serum samples from COVID-19-positive patients, or
from healthy donors, collected before the pandemic. Three peptides
were effective as antigens in conventional peptide-based ELISA, achieving
100% sensitivity and specificity, with high accuracy. The best-performing
peptides, p2pS, p1pN, and p3pN, were associated with superparamagnetic
nanoparticles (SPMNPs) and were used to perform nanomagnetic peptide-based
ELISA. The p2pS–SPMNP conjugate presented 100% sensitivity
and specificity and excellent accuracy (area under the curve (AUC)
= 1.0). However, p1pN and p3pN peptides, when conjugated to SPMNPs,
did not preserve the capacity to differentiate positive sera from
negative sera in all tested samples, yet both presented sensitivity
and specificity above 80% and high accuracy, AUC > 0.9. We obtained
three peptides as advantageous antigens for serodiagnosis. These peptides,
especially p2pS, showed promising results in a nanomagnetic peptide-based
ELISA and may be suitable as a precoated antigen for commercial purposes,
which would accelerate the diagnosis process.