This paper investigates the connexion between the Kannan-Lipton Orbit Problem and the polynomial invariant generator algorithm PILA based on eigenvectors computation. Namely, we reduce the problem of generating linear and polynomial certificates of non-reachability for the Orbit Problem for linear transformations with coefficients in Q to the generalized eigenvector problem. Also, we prove the existence of such certificates for any transformation with integer coefficients, which is not the case with rational coefficients.