A bioengineering method for self-assembly of multifunctional superstructures with in-advance programmable properties has been proposed. The method employs two unique proteins, barnase and barstar, to rapidly join the structural components together directly in water solutions. The properties of the superstructures can be designed on demand by linking different agents of various sizes and chemical nature, designated for specific goals. As a proof of concept, colloidally stable trifunctional structures have been assembled by binding together magnetic particles, quantum dots, and antibodies using barnase and barstar. The assembly has demonstrated that the bonds between these proteins are strong enough to hold macroscopic (5 nm-3 μm) particles together. Specific interaction of such superstructures with cancer cells resulted in fluorescent labeling of the cells and their responsiveness to magnetic field. The method can be used to join inorganic moieties, organic particles, and single biomolecules for synergistic use in different applications such as biosensors, photonics, and nanomedicine.superstructures | cancer cells | targeting | fusion proteins | magnetic nanoparticles R ecently, nanoparticles have become attractive objects for life science applications, in particular, in such rapidly growing areas as express diagnostics and advanced medical treatment. Encapsulation of nanoparticles with drug molecules (1, 2) or attaching them to viruses, bacteria, etc. are of special interest. Time-controlled release of the absorbed drugs would be advantageous for treatment of many diseases, e.g. diabetes, because of a decreased number of injections compared to that of molecular insulin. Furthermore, fluorescent or colored particles such as quantum dots (QD) (3), nanodiamonds (4), and gold nanoparticles (5) can be used for diagnostics as markers that provide visual information about the distribution of labeled agents in tissues and blood. Magnetic particles (MP) (6) can be also used as efficient labels for MRI diagnostics and can be precisely quantified even inside a living organism by an external induction probe (7,8). At present, MP are widely studied for hyperthermia of tumors by heating in an AC magnetic field and for targeted delivery of drugs by magnetic field gradients, to avoid systemic intoxication of the organism (9, 10). Specific immunological targeting of nanoparticles by antibodies against pathogenic cells is another noteworthy application. Not only does it allow marking tumors for accurate dissection, but it also enhances drug delivery to the target cells.The above-mentioned functional aspects of nanoparticles are brought into play in many life science applications. In certain cases, however, it would be beneficial to use multifunctional structures (11-13), which consist of several types of particles. Extensive studies were devoted to the synthesis of hybrid complexes of magnetic particles and different fluorophores (quantum dots or conventional chemical dyes) to allow visual MP tracking. Most approaches (14-16) emp...