This paper addresses the challenge of extracting meaningful information
from measured bioelectric signals generated by complex, large scale
physiological systems such as the brain or the heart. We focus on a combination
of the well-known Laplacian Eigenmaps machine learning approach with dynamical
systems ideas to analyze emergent dynamic behaviors. The method reconstructs the
abstract dynamical system phase-space geometry of the embedded measurements and
tracks changes in physiological conditions or activities through changes in that
geometry. It is geared to extract information from the joint behavior of time
traces obtained from large sensor arrays, such as those used in
multiple-electrode ECG and EEG, and explore the geometrical structure of the low
dimensional embedding of moving time-windows of those joint snapshots. Our main
contribution is a method for mapping vectors from the phase space to the data
domain. We present cases to evaluate the methods, including a synthetic example
using the chaotic Lorenz system, several sets of cardiac measurements from both
canine and human hearts, and measurements from a human brain.