The mannan structure found on the N-linked glycans of the yeast Saccharomyces cerevisiae is composed of a long backbone of ␣-1,6-linked mannose to which are attached branches consisting of two ␣-1,2-linked mannoses followed by an ␣-1,3-linked mannose. In the mutants mnn2 and mnn5, the addition of the first and second of these two mannoses, respectively, is defective. In this paper, we report the identification of the genes corresponding to these mutations. The two genes encode closely related proteins with distant homology to the known Mnn1p ␣-1,3-mannosyltransferase. We show that these proteins are localized in an early compartment of the yeast Golgi and that they are not physically associated with each other or with the two protein complexes known to be involved in synthesizing the ␣-1,6-linked backbone. The identification of Mnn2p and Mnn5p allows us to assign Golgi proteins to all of the catalytic steps in S. cerevisiae mannan synthesis.The N-linked oligosaccharides on the glycoproteins of the yeast Saccharomyces cerevisiae exist in two major forms, which differ in the length of a mannose outer chain attached to the N-linked core (1, 2). The glycoproteins of the internal compartments have a single ␣-1,6-linked mannose attached to one arm of the core, to which two or three further mannoses may be added (3, 4). In contrast, many of the proteins of the cell wall and periplasmic space have attached at the same position a large "mannan" structure of up to 200 mannoses. This consists of a long ␣-1,6-linked backbone with branches of up to three residues in length, the first two being ␣-1,2-linked and the final one being ␣-1,3-linked (Fig. 1A) (1, 3, 5). In addition, a phosphomannose residue is attached to the first mannose on some of the branches. The large amount of mannose in this structure results in mannoproteins being 40% of the dry weight of the cell wall (6). These mannans are thought to shield the cell from digestive enzymes and neutralizing antibodies, to contribute to cell wall integrity, and to serve as ligands for cell-cell associations such as flocculation and host cell attachment during invasive growth (6 -8). For the soluble proteins of the periplasmic space, the large sugar structures may prevent loss through the cell wall by contributing to hydrodynamic volume. Similar large mannose-containing oligosaccharides are also found on the cell wall proteins of many fungi and yeasts including Aspergillus, Candida, Fusarium, Schizosaccharomyces, and Trichophyton, suggesting that they are a general feature of yeast and fungi (9 -13). The backbone is usually ␣-1,6-linked mannose, and the first branch is usually an ␣-1,2-linked mannose, but the rest of the side chain varies greatly between species. Mannoses of varying number can be present in a variety of linkages, and other sugars can be incorporated including N-acetylglucosamine and galactose. This variation of the side chain may reflect evolutionary pressures to evade cell walldigesting hydrolases, immune responses, and sugar-binding killer toxins from othe...