Selective synthesis of particles of angstrom to nanometer size consisting of one to many metal atoms is instrumental in various applications, but it has been hampered by the tendency of the metal atom to form large clusters. We found, as studied by the state-of-the-art electron microscopic technique, a strategy to produce metal-containing nanoparticles isolated from each other by depositing metal atoms in a hydrophilic hole on or in the interior of a carbon nanotube as demonstrated by the reaction of Gd(OAc) 3 with oxidized single-wall nanohorns. Besides the potential utilities of the deposited metal clusters, the metal deposition protocol provides a method to control permeation of molecules through such openings.carbon nanotube ͉ metal nanoparticle ͉ self-assembly ͉ metal deposition A s has been amply demonstrated in chemistry by way of metal-catalysis, metal-complexation should immensely widen the scope of carbon cluster science (1-5). Thus, metalcontaining hollow carbon clusters, such as endohedral metallofullerenes (6, 7) and carbon nanotube (NT) filled with metal atoms (3,4,(8)(9)(10)(11)(12), have been suggested as promising materials. However, the methodology to rationally control the size and the location of the metal clusters and to ensure high-yield production of the material on a large scale has been lacking. We report here a method for forming a one-to multiatom metal cluster specifically at the hydrophilic hole opening of a NT (8,13,14) as demonstrated by deposition of Gd(OAc) 3 in single-wall carbon nanohorns (NHs), a new variety of single-wall NTs (15). The hole-selective deposition of the Gd atoms allows atomic-scale detection of the structural defect in the graphitic materials, and, on a bulk scale, controls the permeability of molecules through the holes. The result would find use for modulation of the electronic properties of NTs (16).Attachment of one atom or a multiatomic cluster onto a selected location of the surface of materials is intellectually challenging and practically useful. Because the oxidized edge of NT is rich in hydrophilic functional groups, such as hydroxy and carboxyl groups (8,13,14,(17)(18)(19), and hence creates a ''locally amphiphilic'' structure (20) on a graphene sheet, we considered that selective accumulation of hydrophilic metal ions, one by one through self-assembly, onto a small hole of a partially oxidized graphene sheet should be possible. We report that treatment of single-wall NH possessing hole openings of several angstroms to Ϸ2-nm diameter with methanolic Gd(OAc) 3 ⅐(H 2 O) 4 permits selective deposition of one to several Gd(III) atoms in an opening at the tip of the tube, or a cluster of an average 1.6-nm diameter in the interior of an opening on the sidewall. The valence and the number of the deposited metal atoms were determined by high-resolution transmission electron microscopy (TEM) and quantitative electron energy-loss spectrometry (EELS) with atomic sensitivity in a dedicated scanning TEM (STEM) with 0.5-nm spatial resolution. With this analytical ...