Vector boson fusion, originally proposed as an alternative channel for finding heavy Higgs, has now established itself as a crucial search scheme to probe different properties of Higgs or for new physics. We explore the merit of deep-learning entirely from the low-level calorimeter data searching for invisibly decaying Higgs, as a choice to supersede decades-old faith on its salient underlying event structure produced in vector boson fusion. We investigate among different neural network architectures considering both low-level and high-level input variables as a detailed comparative analysis. To have a consistent comparison with existing techniques, we closely follow a recent experimental study of CMS search on invisible Higgs with 36 fb −1 data. We find that sophisticated deep-learning techniques have the impressive capability to improve the bound on invisible branching ratio by a factor of three, utilising the same amount of data. Without relying on any exclusive event reconstruction, this novel technique can provide the most stringent bounds on the invisible branching ratio of the SM-like Higgs boson. Such an outcome has the ability to constraint many different BSM models severely.