Diatoms are ubiquitous microalgae that have developed remarkable metabolic plasticity and gene diversification. Here we report the first elucidation of the complete biosynthesis of sterols in the lineage. The study has been carried out on the bloom-forming species Skeletonema marinoi and Cyclotella cryptica that synthesise an ensemble of sterols with chemotypes of animals (cholesterol and desmosterol), plants (dihydrobrassicasterol and 24-methylene cholesterol), algae (fucosterol) and marine invertebrates (clionasterol). In both species, sterols derive from mevalonate through cyclization of squalene to cycloartenol by cycloartenol synthase. The pathway anticipates synthesis of cholesterol by enzymes of the phytosterol route in plants, as recently reported in Solanaceae. Major divergences stem from reduction of Δ24(28) and Δ24(25) double bonds which, in diatoms, are apparently dependent on sterol reductases of fungi, algae and animals. Phylogenetic comparison revealed a good level of similarity between the sterol biosynthetic genes of S. marinoi and C. cryptica with those in the genomes of the other diatoms sequenced so far. Sterols are vital components of all eukaryotic cells where they modulate structure and function of membranes and, as precursors of signaling molecules, they control growth and development. Plant sterols, commonly named phytosterols, are involved in morphogenesis, development, reproduction and stress response 1-3. Analogously, microalgal sterols showed critical physiological roles related to photosynthesis, growth, light response and fatty acid metabolism 4. Sterols are terpenes deriving from a complex process of polymerization of six isoprene units. In animals and fungi, the mevalonic acid (MVA) pathway is the only route for the biosynthesis of the isoprene units isopentenyl pyrophosphate (IPP) and dimethylallyl pyrophosphate (DMAPP). In higher plants and algae, IPP and DMAPP derive either from the MVA pathway in the cytoplasm or the methylerythritol phosphate (MEP) pathway in the plastids 5. Without a clear cellular compartmentalization, both biochemical routes have been also reported in mosses and streptomyces. Sterol biosynthesis from IPP and DMAPP is generally taxa-specific and proceeds via lanosterol by lanosterol synthase (LSS) in nonphotosynthetic organisms (e.g. animals and fungi) or cycloartenol by cycloartenol synthase (CAS) in photosynthetic lineages (e.g. plants and algae) 6. Cholesterol is the major animal sterol but its biosynthesis in tomato has been recently shown to derive from a cycloartenol-dependent pathway composed of enzymes either shared with phytosterols or evolved from phytosterol biosynthetic genes 7. Furthermore, insects and lower eukaryotes, including marine invertebrates and a few microalgae, are suggested to convert phytosterols to cholesterol and vice versa 8-11. Diatoms represent an important component of the aquatic ecosystem 12,13 and form the largest biological group of marine phytoplankton 14,15. These microalgae are major global producers by contributing to...