Frataxin is a mitochondrial iron-binding protein involved in iron storage, detoxification, and delivery for iron sulfur-cluster assembly and heme biosynthesis. The ability of frataxin from different organisms to populate multiple oligomeric states in the presence of metal ions, e.g. Fe 2؉ and Co 2؉ , led to the suggestion that different oligomers contribute to the functions of frataxin. Here we report on the complex between yeast frataxin and ferrochelatase, the terminal enzyme of heme biosynthesis. Protein-protein docking and cross-linking in combination with mass spectroscopic analysis and single-particle reconstruction from negatively stained electron microscopic images were used to verify the Yfh1-ferrochelatase interactions. The model of the complex indicates that at the 2:1 Fe 2؉ -to-protein ratio, when Yfh1 populates a trimeric state, there are two interaction interfaces between frataxin and the ferrochelatase dimer. Each interaction site involves one ferrochelatase monomer and one frataxin trimer, with conserved polar and charged amino acids of the two proteins positioned at hydrogen-bonding distances from each other. One of the subunits of the Yfh1 trimer interacts extensively with one subunit of the ferrochelatase dimer, contributing to the stability of the complex, whereas another trimer subunit is positioned for Fe 2؉ delivery. Single-turnover stopped-flow kinetics experiments demonstrate that increased rates of heme production result from monomers, dimers, and trimers, indicating that these forms are most efficient in delivering Fe 2؉ to ferrochelatase and sustaining porphyrin metalation. Furthermore, they support the proposal that frataxin-mediated delivery of this potentially toxic substrate overcomes formation of reactive oxygen species.In an oxidative environment, like that of the mitochondrial matrix (1), free Fe 2ϩ is rapidly oxidized to Fe 3ϩ with the subsequent formation of insoluble Fe(OH) 3 . This type of Fe 2ϩ oxidation generally produces oxygen radicals. In addition, through the Fenton reaction in which Fe 2ϩ reacts with hydrogen peroxide, highly toxic hydroxyl radicals are produced. Organisms have evolved mechanisms for the control of iron uptake, delivery, storage, and detoxification, including those for Fe 2ϩ handling within mitochondria. Frataxin, a major mitochondrial protein player in this process, has a central role in iron detoxification and iron delivery in heme and iron-sulfur cluster (ISC) 5 synthesis (2-5) as well as in aconitase repair (6). Low levels of frataxin in humans are responsible for the progressive neurodegenerative disease Friedreich's ataxia, caused by trinucleotide repeat expansions in the first intron of the frataxin gene and the consequent gene silencing. Frataxin deficiency results in aberrations in cellular iron homeostasis, progressive accumulation of iron in mitochondria, high levels of oxidative stress, and deficiency in heme and ISC biosynthesis (4, 7-9).Numerous studies focusing on human and Saccharomyces cerevisiae (Yfh1) frataxin (FXN) and their Esch...