Karst groundwater is one of the important drinking water sources in karst areas, and it has an important role in maintaining the regional ecosystem and human health. The study of microplastics (MPs) in karst groundwater has rarely been reported, and the occurrence and migration behavior of MPs under the unique environmental conditions of karst is unclear. This study selected cave groundwater and common MPs in karst areas to explore the occurrence characteristics of MPs in groundwater to clarify the factors affecting the distribution and migration of MPs. The results showed that the abundance of MPs in karst groundwater was between 2.33 and 9.50 items·L−1, with an average abundance of 4.50 items·L−1. The microplastic size, type, color, and chemical composition were primarily 1~5 mm, film and fiber, color and transparent, and PS and PE, respectively. The risk characterization ratio (RCR) index results indicated that 80% of the samples were at a low ecological risk level, whereas 60% of the sampling points after concentrated rainfall in June were a medium ecological risk. The study showed that rainfall events significantly changed the abundance and migration of MPs in karst groundwater. The Pearson analysis showed a positive correlation between microplastic distribution and suspended particles (SP), total organic carbon (TOC), and water velocity (WV) in water. The study indicated that strong soil erosion in karst areas may also be one of the main sources of MPs in karst groundwater, and that karst groundwater microplastic pollution is an environmental problem that should not be ignored.