2018
DOI: 10.1016/j.gene.2017.12.035
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Mining Ferula gummosa transcriptome to identify miRNAs involved in the regulation and biosynthesis of terpenes

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Cited by 50 publications
(19 citation statements)
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“…Significantly negative MFE and MEFI value stipulated appropriate folding and stable secondary structures of the predicted miRNAs . A good percentage of GC content (> 40%) in the miRNA sequences further specified their stability . When examined terpene biosynthesis, the miRNA families, miR2108, miR4993, miR396, miR5015, and miR414, targeting terpene pathway genes were more or less in agreement with the previous findings on terpene biosynthesis occurring in different plant species, Mentha spp., Z. officinale , Coffea , W. somnifera and Viscum album L. .…”
Section: Discussionsupporting
confidence: 86%
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“…Significantly negative MFE and MEFI value stipulated appropriate folding and stable secondary structures of the predicted miRNAs . A good percentage of GC content (> 40%) in the miRNA sequences further specified their stability . When examined terpene biosynthesis, the miRNA families, miR2108, miR4993, miR396, miR5015, and miR414, targeting terpene pathway genes were more or less in agreement with the previous findings on terpene biosynthesis occurring in different plant species, Mentha spp., Z. officinale , Coffea , W. somnifera and Viscum album L. .…”
Section: Discussionsupporting
confidence: 86%
“…However, miRNAs of a family may not be conserved with respect to their sequence and/or secondary structure . Significantly negative MFE and MEFI value stipulated appropriate folding and stable secondary structures of the predicted miRNAs . A good percentage of GC content (> 40%) in the miRNA sequences further specified their stability .…”
Section: Discussionmentioning
confidence: 99%
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“…Transcription factors regulating a variety of terpenes have also been identified; in cotton WRKY1 positively regulates (+)-□-cadinene synthase (CAD1) [65], and in kiwifruit, NAC transcription factors were found to regulate the expression of TPS1 in ripe fruit [66]. Post-transcriptional regulation includes the action of miRNAs, which have been identified in plants such as Ocimum basilicum [67] and Ferula gummosa [68]. The existence of SNPs between transcripts from each chemotype may suggest differences in functionality of each linalool synthase; however, few of the SNPs are shared among linalool-plants, such that the regulation of (R)-(-)-linalool synthase in O. harringtonii may be associated only with upregulation and the allele found in linalool+ individuals.…”
Section: Resultsmentioning
confidence: 99%