Large anions are attracted to hydrophobic surfaces while smaller, well solvated ions are repelled. Using a combination of explicit solvent and continuum model simulations we show that this leads to significant ion-specific protein-protein interactions due to hydrophobic patches on the protein surfaces. In solutions of NaI and NaCl we calculate the potentials of mean force and find that the resulting second virial coefficients for lysozyme correspond well with experiment. We argue that ionic interactions with nonpolar surface groups may play an important role for biomolecular assembly and Hofmeister-type effects.Molecular dynamics (MD) simulations [1][2][3][4][5] have shown that large anions are attracted to hydrophobic interfaces while smaller anions are repelled. These findings are supported by a number of experimental studies [6 -11]. Measurements on bulk electrolytes also indicate that nonpolar surfaces interact more strongly with ions of larger size. For example, excess chemical potential differences, ex for salts with identical cations measure the change in free energy associated with anion exchange. Exchanging iodide with chloride in the presence of a common cation M, one obtains ex I!Cl ln MCl = MI , where are the mean activity coefficients and is the inverse thermal energy. Experimental measurements for this quantity are shown in Fig. 1, for a series of increasingly hydrophobic alkyl ammonium cations. The results indicate that chloride is the favored anion for the small ammonium ion ( ex < 0) while increasing the alkyl chain length of the cation causes a shift in preference towards iodide ( ex > 0).Similar ion-specific surface effects may also play an important role in protein solutions. While the interface of water soluble, globular proteins are usually polar, solvent exposed patches of hydrophobic surface groups do indeed occur [12]. In recent simulation work [5] we showed that iodide ions show a preference for hydrophobic regions of a simple, nonspecific, protein model. This being the case, it is then likely that ion adsorption at hydrophobic surfaces will also affect the important phenomenon of protein aggregation. Tellingly, light scattering experiments [13] and crystallization studies [14] show that the self-association of the lysozyme protein is assisted by large anions such as iodide and thiocyanate, while the influence of chloride is less pronounced. Despite this evidence, specific ion binding to nonpolar surface groups has not yet been explicitly included in any theoretical studies on protein aggregation. In previous work [15][16][17] ion-specific association has instead been attributed to attractive dispersion interactions between ions and charged macrospheres. However, simulations using explicit solvent models of ions at surfaces [4,5,18] suggest that surface modified ion solvation plays a major role in the ion-surface interaction and that, surprisingly, the water mediated dispersion component of the interaction may even be repulsive [4]. The aim of the work, reported in this Letter, is to pro...