The many channels of the Canadian Arctic Archipelago (CAA) represent an important export pathway for Arctic outflow waters and the transport of freshwater to the North Atlantic (Carmack et al., 2016). Located between Ellesmere Island and Greenland, Nares Strait is the northernmost outflow gateway of the Arctic Ocean, and one of two main passages through the CAA (Figure 1). Nares Strait connects the Lincoln Sea, an ice-covered continental shelf sea, with northern Baffin Bay, which harbors the ecologically significant North Water (NOW) polynya, or Pikialasorsuaq in Greenlandic (Eegeesiak et al., 2017). Nares Strait is largely a flow-through system, transporting Arctic waters southwards through a series of channels and basins, which from north to south are: Robeson Channel, Hall Basin, Kennedy Channel, Kane Basin, and finally Smith Sound (Figure 1a). The net southward volume transport through Nares Strait is estimated to be 0.8 ± 0.3 Sv, approximately equal to the net volume flux of Pacific water into the Arctic Ocean via Bering Strait (Münchow et al., 2006). In Kane Basin the