In this study, we investigated the occurrence of antimicrobial resistance in commensal
Escherichia coli isolated from healthy Thoroughbred (TB) racehorses in Japan. A total of
212 fecal samples were individually collected from TB racehorses from March 2017 to August
2018 at Japan Racing Association training centers. E. coli was isolated by using selective
agar media, deoxycholate-hydrogen sulfide-lactose (DHL) and eosin methylene blue (EMB). A
total of 417 E. coli isolates were examined against 10 antimicrobial agents by using the
broth microdilution method. The 417 E. coli isolates were phylogenetically grouped using a
multiplex polymerase chain reaction. The highest proportion of resistance was observed for
streptomycin (30.9%, 129/417) followed by ampicillin (19.4%, 81/417), trimethoprim (15.8%,
66/417), tetracycline (8.4%, 35/417), chloramphenicol (2.6%, 11/417), kanamycin (1.2%,
5/417), nalidixic acid (0.5%, 2/417), cefazolin (0.2%, 1/417), colistin (0.2%, 1/417), and
gentamycin (0%). Multidrug-resistant (MDR) E. coli was detected in 7.9% (33/417) of
isolates. The proportions of resistance against ampicillin, streptomycin, kanamycin, and
chloramphenicol and of multidrug-resistant phenotypes in E. coli belonging to phylogenetic
group B2 were significantly higher than those of other groups. This study clarified the
distribution of antimicrobial-resistant (AMR) E. coli in Japanese racehorses. A continuous
monitoring program for antimicrobial resistance is required to control the spread of AMR
bacteria in racehorses.