Background
The Neotropical fruit fly
Drosophila paulistorum
(Diptera: Drosophilidae) is a species complex
in statu nascendi
comprising six reproductively isolated semispecies, each harboring mutualistic
Wolbachia
strains. Although wild type flies of each semispecies are isolated from the others by both pre- and postmating incompatibilities, mating between semispecies and successful offspring development can be achieved once flies are treated with antibiotics to reduce
Wolbachia
titer. Here we use RNA-seq to study the impact of
Wolbachia
on
D. paulistorum
and investigate the hypothesis that the symbiont may play a role in host speciation. For that goal, we analyze samples of heads and abdomens of both sexes of the Amazonian, Centro American and Orinocan semispecies of
D. paulistorum.
Results
We identify between 175 and 1192 differentially expressed genes associated with a variety of biological processes that respond either globally or according to tissue, sex or condition in the three semispecies. Some of the functions associated with differentially expressed genes are known to be affected by
Wolbachia
in other species, such as metabolism and immunity, whereas others represent putative novel phenotypes involving muscular functions, pheromone signaling, and visual perception.
Conclusions
Our results show that
Wolbachia
affect a large number of biological functions in
D. paulistorum
, particularly when present in high titer. We suggest that the significant metabolic impact of the infection on the host may cause several of the other putative and observed phenotypes. We also speculate that the observed differential expression of genes associated with chemical communication and reproduction may be associated with the emergence of pre- and postmating barriers between semispecies, which supports a role for
Wolbachia
in the speciation of
D. paulistorum
.
Electronic supplementary material
The online version of this article (10.1186/s12864-019-5816-9) contains supplementary material, which is available to authorized users.