Nocardioides
               
            
            salsibiostraticola sp. nov., isolated from biofilm formed in coastal seawater

Cho, Yirang; Jang, Gwang Il; Hwang, Chung Yeon; Kim, Eunhye; Cho, Byung Cheol

doi:10.1099/ijs.0.051037-0

Cited by 14 publications

(3 citation statements)

References 47 publications

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“…At the time of preparing this paper, the genus contained 73 species with validly published names (http://www.bacterio.net/nocardioides.html; Euzéby, 1997). Some of the 73 species were isolated from saline–alkaline environments; for instance, four type strains were isolated from alkaline soils (Yoon et al , 2005a, b, c, 2006), nine type strains were isolated from marine sediments (Yi & Chun, 2004a, b; Lee et al , 2007; Lee, 2007; Park et al , 2008; Dastager et al , 2009; Kim et al , 2009; Fan et al ; 2014, Zhang et al , 2014), one species was isolated from a salt lake (Lawson et al , 2000) and three species were isolated from seawater (Choi et al , 2007; Cho et al , 2013a, b).…”

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confidence: 99%

Nocardioides deserti sp. nov., an actinobacterium isolated from desert soil

Dong

Habden

et al. 2015

International Journal of Systematic and Evolutionary Microbiology

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A rod-or coccus-shaped, non-spore-forming actinobacterium, designated strain SC8A-24 T , was isolated from a soil sample collected from the rhizosphere of Alhagi sparsifolia on the southern edge of the Taklimakan desert, Xinjiang, China, and examined by a polyphasic approach to clarify its taxonomic position. This actinobacterium was Gram-staining-positive and aerobic. Substrate and aerial mycelia were not observed, and no diffusible pigments were observed on the media tested. Strain SC8A-24 T grew optimally without NaCl at 28-30 6C and pH 7.0-8.0.Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain SC8A-24 T belonged to the genus Nocardioides and shared the highest 16S rRNA gene sequence similarity with Nocardioides salarius CL-Z59 T (96.51 %), N. pyridinolyticus OS4 T (96.43 %) and N.ginsengagri BX5-10 T (96.37 %). The DNA G+C content of strain SC8A-24 T was 71 mol%. The cell-wall peptidoglycan contained LL-2,6-diaminopimelic acid, and MK-8(H 4 ) was the predominant menaquinone. The major polar lipids were phosphatidylglycerol, diphosphatidylglycerol, an unidentified glycolipid and an unidentified phospholipid. The major fatty acids were C 17 : 1 v8c, 10-methyl C 17 : 0 and C 18 : 1 v9c. On the basis of phylogenetic analysis and phenotypic and chemotaxonomic characteristics, strain SC8A-24 T represents a novel species of the genus Nocardioides, for which the name Nocardioides deserti sp. nov. is proposed. The type strain is SC8A-24 T (5DSM 26045 T 5CGMCC 4.7183 T ).

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confidence: 99%

Nocardioides deserti sp. nov., an actinobacterium isolated from desert soil

Dong

Habden

et al. 2015

International Journal of Systematic and Evolutionary Microbiology

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“…At present, the genus contains more than 90 species with validly published names ( http://www.bacterio.net/nocardioides.html ). Strains of this genus have been isolated from various sources such as soils (Sultanpuram et al 2015 ; Sun et al 2014 ; Lee and Seong 2014 ; Srinivasan et al 2014 ; Liu et al 2015 ), plant rhizosphere (Tuo et al 2015 ; Xu et al 2016 ; Kämpfer et al 2016 ; Glaeser et al 2014 ), marine and lake environments (Wang et al 2016 ; Deng et al 2015 ; Fan et al 2014 ; Zhang et al 2014 ; Cho et al 2013a , b ) as well as from within animals and plants (Lin et al 2015 ).…”

Section: Introductionmentioning

confidence: 99%

Nocardioides astragali sp. nov., isolated from a nodule of wild Astragalus chrysopterus in northwestern China

Zhang

et al. 2018

Antonie van Leeuwenhoek

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A Gram-positive, non-motile, rod-shaped bacterial strain, designated HH06T, was isolated from a nodule of Astragalus chrysopterus in northwestern China. Phylogenetic analysis of the 16S rRNA gene sequence showed that the strain is closely related to Nocardioides alpinus Cr7-14T and Nocardioides furvisabuli DSM 18445T with 98.5 and 98.1% similiarity, respectively. Growth was observed at 4–28 °C in R2A medium (optimum at 25 °C), at 10–30 °C in YMA and LB medium (optimum in both at 28 °C) and at pH 5.0–10.0 in R2A medium (optimum at pH 7.0–8.0). The cell wall peptidoglycan was found to contain LL-diaminopimelic acid as the principal diamino acid and MK-8(H4) was identified as the predominant menaquinone. The major polar lipids were identified as phosphatidylinositol, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylcholine, two unidentified glycolipids and two unidentified polar lipids. The major fatty acids were identified as iso-C16:0 (32.8%) and C18:1 ω9c (15.1%). The DNA G+C content of strain HH06T was determined to be 71.4 mol%. Based on phenotypic, chemotaxonomic, phylogenetic properties and DNA–DNA relatedness, it is concluded that strain HH06T represents a novel species of the genus Nocardioides, for which the name Nocardioides astragali sp. nov. is proposed. The type strain is HH06T (= CGMCC 4.7327T = NBRC 112322T).Electronic supplementary materialThe online version of this article (10.1007/s10482-018-1020-1) contains supplementary material, which is available to authorized users.

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“…These Gram-positive, aerobic and cardioform actinomycetes exhibit a high G+C content and are able to develop mycelium [21] , [22] . Currently the genus Nocardioides contains 72 species, including eight described in 2013 and species from the genera Pimelobacter and Arthrobacter that were reclassified in the genus Nocardioides [23] , [24] , [25] , [26] , [27] , [28] , [29] , [30] , [31] , [32] , [33] , [34] , [35] , [36] (LPSN, http://www.bacterio.net/ ). Members of the genus Nocardioides are mostly environmental bacteria found in soil or plants.…”

Section: Introductionmentioning

confidence: 99%

Noncontiguous finished genome sequence and description of Nocardioides massiliensis sp. nov. GD13T

Dubourg

Sankar

Rathored

et al. 2016

New Microbes and New Infections

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Nocardioides massiliensis sp. nov strain GD13T is the type strain of N. massiliensis sp. nov., a new species within the genus Nocardioides. This strain was isolated from the faeces of a 62-year-old man admitted to intensive care for Guillain-Barré syndrome. Nocardioides massiliensis is a strictly aerobic Gram-positive rod. Herein we describe the features of this bacterium, together with the complete genome sequence and annotation. The 4 006 620 bp long genome contains 4132 protein-coding and 47 RNA genes.

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Nocardioides salsibiostraticola sp. nov., isolated from biofilm formed in coastal seawater

Cited by 14 publications

References 47 publications

Nocardioides deserti sp. nov., an actinobacterium isolated from desert soil

Nocardioides deserti sp. nov., an actinobacterium isolated from desert soil

Nocardioides astragali sp. nov., isolated from a nodule of wild Astragalus chrysopterus in northwestern China

Noncontiguous finished genome sequence and description of Nocardioides massiliensis sp. nov. GD13T

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