“…Given that our data strongly link irf8 loss with complement deficiency, and loss-of-function mutations in C1q genes are associated with immunodeficiencies and autoimmune conditions in mammals (Botto, 1998; Brown et al, 2002; Degn et al, 2011; Macedo and Isaac, 2016; Roumenina et al, 2011; Warren et al, 2002), we propose that C1q defects may underlie the susceptibility to gut microbial dysbiosis we found in zebrafish irf8 mutants and possibly also to infections known in IRF8-deficient animals and humans, but this requires further investigation (Hambleton et al, 2011; Langlais et al, 2016; Salem and Gros, 2013). In support of this, the role of complement genes in hostmicrobe interactions and modulation of cutaneous microbiota has previously been shown (Chehoud et al, 2013; Hajishengallis et al, 2013, 2017; Hasegawa et al, 2014). Consistent with the possibility that IRF8 may transcriptionally activate c1q genes in both subsets of adult zebrafish intestinal macrophages, irf8 was abundantly expressed in most, if not all, intestinal macrophages (Figure S6).…”