We have studied cofactor-induced conformational changes of the maltose ATP-binding cassette transporter by employing limited proteolysis in detergent solution. The transport complex consists of one copy each of the transmembrane subunits, MalF and MalG, and of two copies of the nucleotide-binding subunit, MalK. Transport activity further requires the periplasmic maltose-binding protein, MalE. Binding of ATP to the MalK subunits increased the susceptibility of two tryptic cleavage sites in the periplasmic loops P2 of MalF and P1 of MalG, respectively. Lys 262 of MalF and Arg 73 of MalG were identified as probable cleavage sites, resulting in two N-terminal peptide fragments of 29 and 8 kDa, respectively. Trapping the complex in the transition state by vanadate further stabilized the fragments. In contrast, the tryptic cleavage profile of MalK remained largely unchanged. ATP-induced conformational changes of MalF-P2 and MalG-P1 were supported by fluorescence spectroscopy of complex variants labeled with 2-(4-maleimidoanilino)naphthalene-6-sulfonic acid. Limited proteolysis was subsequently used as a tool to study the consequences of mutations on the transport cycle. The results suggest that complex variants exhibiting a binding protein-independent phenotype (MalF500) or containing a mutation that affects the "catalytic carboxylate" (MalKE159Q) reside in a transition state-like conformation. A similar conclusion was drawn for a complex containing a replacement of MalKQ140 in the signature sequence by leucine, whereas substitution of lysine for Gln 140 appears to lock the transport complex in the ground state. Together, our data provide the first evidence for conformational changes of the transmembrane subunits of an ATPbinding cassette import system upon binding of ATP.
ATP-binding cassette (ABC)3 proteins exist in all living organisms and form one of the largest superfamilies. They are integral to almost every biological process and physiological system. Most are involved in the uptake or export of an enormous variety of substances across cell membranes, from small ions to large polypeptides. Many of these proteins are of considerable medical importance. Mutations in several "ABC genes" lead to genetic diseases, such as cystic fibrosis, Tangier disease, and adrenoleukodystrophy, or confer resistance to antibiotics and chemotherapeutic agents (1).ABC transporters share a common architectural organization comprising two hydrophobic transmembrane domains (TMDs) that form the translocation pathway and two hydrophilic nucleotide-binding (ABC) domains (NBDs) that hydrolyze ATP. In prokaryotes, these domains are mostly expressed as separate protein subunits, whereas in eukaryotes, especially in mammalian cells, they are usually fused into a single polypeptide chain.The ABC domains are characterized by a set of Walker A and B motifs that are involved in nucleotide binding and by the unique LSGGQ signature sequence (2). To date, the crystal structures of several mostly prokaryotic ABC domains have been reported (reviewed i...