Boundary layer dynamics are investigated using a 2‐D numerical model that solves the Volume‐Averaged Reynolds‐Averaged Navier‐Stokes equations, with a VOF‐tracking scheme and a k ‐ ϵ turbulence closure. The model is validated with highly resolved data of dam break driven swash flows over gravel impermeable and permeable beds. The spatial gradients of the velocity, bed shear stress, and turbulence intensity terms are investigated with reference to bottom boundary layer (BL) dynamics. Numerical results show that the mean vorticity responds to flow divergence/convergence at the surface that result from accelerating/decelerating portions of the flow, bed shear stress, and sinking/injection of turbulence due to infiltration/exfiltration. Hence, the zero up‐crossing of the vorticity is employed as a proxy of the BL thickness inside the shallow swash zone flows. During the uprush phase, the BL develops almost instantaneously with bore arrival and fluctuates below the surface due to flow instabilities and related horizontal straining. In contrast, during the backwash phase, the BL grows quasi‐linearly with less influence of surface‐induced forces. However, the infiltration produces a reduction of the maximum excursion and duration of the swash event. These effects have important implications for the BL development. The numerical results suggest that the BL growth rate deviates rapidly from a quasi‐linear trend if the infiltration is dominant during the initial backwash phase and the flat plate boundary layer theory may no longer be applicable under these conditions.