Biofilms are defined as layers of cells of microorganisms 17 adhered to the surface of a substrate and embedded in an extracellular matrix 18 and provide an appropriate environment for increased genetic exchange. 19 Extracellular DNA (eDNA) is an essential component of the extracellular matrix 20 of microbial biofilms, but the pathway(s) responsible for DNA release are largely 21 unknown. Autolysis (either spontaneous or phage-induced) has been proposed 22 the major event leading to the appearance of eDNA. The 'suicidal tendency' of 23 Streptococcus pneumoniae is well-known, with lysis mainly caused by the 24 triggering of LytA, the major autolytic amidase. However, the LytC lysozyme 25 and CbpD (a possible murein hydrolase) have also been shown involved. The 26 present work examines the relationship between eDNA, autolysins, and the 27 formation and maintenance of in vitro pneumococcal biofilms, via fluorescent 28 labelling combined with confocal laser scanning microscopy, plus genetic 29 transformation experiments. Bacterial DNA release mechanisms other than 30 those entailing lytic enzymes were shown to be involved by demonstrating that 31 horizontal gene transfer in biofilms takes place even in the absence of 32 detectable autolytic activity. It had been previously suggested that the quorum 33 sensing systems ComABCDE and LuxS/AI-2 are involved in the production of 34 eDNA as a response to the accumulation of quorum sensing signals, although 35 our immunofluorescence results do not support this hypothesis. Evidence that 36 the release of DNA is somehow linked to the production of extracellular vesicles 37 by S. pneumoniae is provided. 38 IMPORTANCE Most human bacterial infections are caused by 39 microorganisms growing as biofilms. Bacteria in biofilms are less susceptible to 40 antimicrobials and to killing by the host immune system, are very difficult to 41 eliminate and cause recalcitrant and persistent diseases. Extracellular DNA is 42 one of the major components of the bacterial biofilm matrix. In the present 43 study, we provide direct evidence of the existence of biologically active 44 (transforming), extracellular DNA in Streptococcus pneumoniae biofilms. In 45 3previous studies, the involvement of three pneumococcal choline-binding 46 proteins with autolytic activity (LytA, LytC and CbpD) in DNA release had been 47 reported. In contrast, we demonstrate here that pneumococcal in vitro biofilms 48 do contain eDNA, even in the absence of these enzymes. Moreover, our results 49 suggest that DNA release in S. pneumoniae biofilms is connected with the 50 production of extracellular vesicles and that this DNA is associated to the outer 51 part of the vesicles. 52 53 4The human pathogen Streptococcus pneumoniae is a leading cause of 54 pneumonia, meningitis and bloodstream infections in the elderly, and one of the 55 main pathogens responsible for middle ear infections in children. It is carried 56 asymptomatically in the nasopharynx of many healthy adults, and in as many as 57 20-40% of healthy children ...