RNA editing and cytoplasmic male sterility are two important phenomena in higher plant mitochondria. To determine whether correlations might exist between the two, RNA editing in different tissues of Sorghum bicolor was compared employing reverse transcription-PCR and subsequent sequence analysis. In etiolated shoots, RNA editing of transcripts of plant mitochondrial atp6, atp9, nad3, nad4, and rps12 genes was identical among fertile or cytoplasmic male sterile plants. We then established a protocol for mitochondrial RNA isolation from plant anthers and pollen to include in these studies. Whereas RNA editing of atp9, nad3, nad4, and rps12 transcripts in anthers was similar to etiolated shoots, mitochondrial atp6 RNA editing was strongly reduced in anthers of the A3Tx398 male sterile line of S. bicolor. atp6 transcripts of wheat and selected plastid transcripts in S. bicolor showed normal RNA editing, indicating that loss of atp6 RNA editing is specific for cytoplasmic male sterility S. bicolor mitochondria. Restoration of fertility in F1 and F2 lines correlated with an increase in RNA editing of atp6 transcripts. Our data suggest that loss of atp6 RNA editing contributes to or causes cytoplasmic male sterility in S. bicolor. Further analysis of the mechanism of cell type-specific loss of atp6 RNA editing activity may advance our understanding of the mechanism of RNA editing.Mitochondria are found in almost all eukaryotes, with the exception of a few parasitic unicellular organisms. Complete sequences of mitochondrial (mt) genomes are now available from a large number of different eukaryotes, including the liverwort Marchantia polymorpha (1) and the higher plant Arabidopsis thaliana (2). The mt genome of liverwort consists of a single circular molecule (3, 4). In remarkable contrast, the mt genome of A. thaliana is split into several different subcircles (5). A multipartite mt structure due to recombination events was first observed in Brassica campestris (6), and appears to be a general feature of higher plants (7). One of the consequences of recombinational activity in higher plant mitochondria is the generation of chimeric reading frames (crf), e.g., the crf pcf found in petunia (8), orf107 of Sorghum bicolor line IS1112C (9), and T-urf13 found in the T cytoplasm of Zea mays (10-12), which is generated from nonprotein-coding sequences only.Crfs are often associated with cytoplasmic male sterility (cms), a genetic trait that has an important economic relevance for the generation of hybrid seed. cms is characterized by aberrations in microsporogenesis or microgametogenesis that result in microspore abortion in higher plants, and are often inherited through the mitochondria of the maternal cytoplasm. Plants carrying the cms trait show a more or less normal phenotype during vegetative growth, but fail to shed viable pollen.Crfs are usually transcribed and subjected to the mt RNA maturation process. The mechanisms of gene expression in plant mitochondria are extremely complex systems involving site-specific...