Layered composite ceramics have wide application in solid‐state lasers. However, the photothermal effect in the layered ceramics has not been clarified, due to the interface effect between layers. In this work, the model of photon propagation and thermal distribution in the Gd3Al3Ga2O12:Ce3+/Y3Al5O12:Cr3+ layered ceramics are established. The property of photon absorption, reflection, transmission, and thermal distribution are studied by combining the Monte Carlo method and the convolution method. It is found that the photon absorption distribution and thermal distribution of this layered ceramics show the gradient change. Furthermore, this change is strongly dependent on the type, beam width, and power of laser. The temperature of layered ceramics induced by Gaussian beam is higher than that induced by flat circular beam. This work provides a useful research method for the design of layered ceramic materials with excellent scintillation performance.