Claudins are tight junction proteins that play a key selectivity role in the paracellular conductance of ions. Numerous studies of claudin function have been carried out using the overexpression strategy to add new claudin channels to an existing paracellular protein background. Here, we report the systematic knockdown of endogenous claudin gene expression in Madin-Darby canine kidney (MDCK) cells and in LLC-PK1 cells using small interfering RNA against claudins 1-4 and 7. In MDCK cells (showing cation selectivity), claudins 2, 4, and 7 are powerful effectors of paracellular Na ؉ permeation. Removal of claudin-2 depressed the permeation of Na ؉ and resulted in the loss of cation selectivity. Loss of claudin-4 or -7 expression elevated the permeation of Na ؉ and enhanced the proclivity of the tight junction for cations. On the other hand, LLC-PK1 cells express little endogenous claudin-2 and show anion selectivity. In LLC-PK1 cells, claudin-4 and -7 are powerful effectors of paracellular Cl ؊ permeation. Knockdown of claudin-4 or -7 expression depressed the permeation of Cl ؊ and caused the tight junction to lose the anion selectivity. In conclusion, claudin-2 functions as a paracellular channel to Na ؉ to increase the cation selectivity of the tight junction; claudin-4 and -7 function either as paracellular barriers to Na ؉ or as paracellular channels to Cl ؊ , depending upon the cellular background, to decrease the cation selectivity of the tight junction.Tight junctions are cell-cell interactions that provide the primary barrier to the diffusion of solutes through the paracellular pathway, creating an ion-selective boundary between the apical and basolateral extracellular compartments (see reviews in Refs. 1-3). The integral membrane proteins of the tight junction include occludin, a 65-kDa membrane protein bearing four transmembrane domains and two extracellular loops, and claudins, a family with at least 22 homologous proteins of 20 -28 kDa that share a common topology with occludin (4 -7).Claudins have been shown to confer ion selectivity to the paracellular pathway. In MDCK 2 cells, claudin-4, -5, -8, -11, and -14 selectively decrease the permeability of cation through tight junction, whereas the permeation of anion is largely unchanged (8 -12). MDCK cells express five endogenous claudins, claudin-1-4 and -7. LLC-PK1 cells express four endogenous claudins, claudin-1, -3, -4, and -7. In LLC-PK1 cells, claudin-2, -15, -16 selectively increase the permeability of cation through the tight junction with no significant effects on anions (13-14). When exogenous claudins are added to the tight junction, they constitute new charge-selective channels leading to a physiological phenotype that combines the contributions of both endogenous and exogenous claudins in the cell. A biochemical inventory of claudin-claudin interactions is not yet available, although the principle of specificity has been demonstrated in mouse L-fibroblasts (15). In addition, although efforts have been made to demonstrate the oligomerization p...