The sequence of the 350 amino acids in the a subunit of GTPase of bovine rod outer segments has been determined. Enriched GTPase mRNA was used to prepare a cDNA library in the expression vector Xgtll and several overlapping cDNA clones corresponding to the a subunit of the GTPase were identified. The cDNA sequence determined contains 93 nucleotides upstream of the 5' end of the coding region, 1050 nucleotides that specify the amino acid sequence, and 45 nucleotides downstream from the 3' end. The previously described partial amino acid sequences and the sequences at the ADP-ribosylation sites for cholera and pertussis toxins are all confirmed and fitted into the present complete sequence. Homologies are found between the sequence of the a subunit and those of other guanine nucleotide-binding proteins, the ras proteins, peptide chain elongation factors EF-Tu and EF-G, and the initiation factor IF2.Early events in light transduction in the vertebrate rod cell involve photoexcitation of rhodopsin (1) (Mr,41,000) is ADP-ribosylated by pertussis toxin (11). Interestingly, the a subunit of ROS GTPase (Mr, 39,000) can be ADP-ribosylated at distinct sites by pertussis toxin in the dark (12) and by cholera toxin in the light (13). The ,B subunits derived from each of the three proteins, ROS GTPase, Gs, and G,, are strikingly similar, as judged from their amino acid compositions and from maps of proteolytic products (9).Finally, in all cases, the small y subunits are found tightly bound to the 8 subunit (14-16).Recently, a family of ras oncogene products that bind GTP has been characterized (17,18 ROS GTPase (21,22) also have homologies with the corresponding regions in the ras proteins (23-27).Previously, we (28) and others (29-31) have reported on the amino acid sequence of the fy subunit of ROS GTPase. We used an immunological approach in which polyclonal antibodies against native bovine ROS GTPase were used for probing a cDNA library constructed in the Xgtll expression vector (32). We have now used the same approach in deriving the cDNA sequence of the a subunit of ROS GTPase and report on the complete amino acid sequence, 350 residues, of this subunit. A comparison of the sequence with those of other guanine nucleotide-binding proteins, and of the ras proteins, indeed reveals marked homologies.