The performance of latent thermal energy storage (LTES) heat exchangers is related to the stored energy (i.e. state of charge) during the (dis)charging of the energy storage system. Furthermore, methods to correlate performance indicators such as the averaged effectiveness and phase change time are based solely on the latent heat stored. Therefore, measuring the stored energy in the separate components is crucial to understand the behavior of LTES systems and expand the correlation methods for performance indicators. However, technical limitations often do not allow to measure the stored energy. This article presents a LTES heat exchanger where only measurements at the in-and outlet of the heat transfer fluid and on the outer surface of the heat exchanger were possible. Based on this sparse set of measurements, estimators for the stored energy are developed. To test these estimators, a finite volume model of the LTES heat exchanger is made and fitted to experiments. The estimators for the stored energy in the heat transfer fluid, metal and phase change material reach a maximum deviation of respectively 1.9 %, 10 % and 2.1 % with the stored energy predicted by the finite volume model. By analyzing the stored energy as a function of time, four charging phases can be distinguished. The present correlating methods for performance indicators focus on the third latent phase. By estimating stored energy, the other phases can also be understood and modeled which can expand correlating methods for LTES heat exchangers in future work.