The master circadian clock, located in the mammalian suprachiasmatic nuclei (SCN), generates and coordinates circadian rhythmicity, i.e., internal organization of physiological and behavioral rhythms that cycle with a near 24-h period. Light is the most powerful synchronizer of the SCN. Although other nonphotic cues also have the potential to influence the circadian clock, their effects can be masked by photic cues. The purpose of this study was to investigate the ability of scheduled feeding to entrain the SCN in the absence of photic cues in four lines of house mouse (Mus domesticus). Mice were initially housed in 12:12-h light/dark cycle with ad libitum access to food for 6 h during the light period followed by 4 -6 mo of constant dark under the same feeding schedule. Wheel running behavior suggested and circadian PER2 protein expression profiles in the SCN confirmed entrainment of the master circadian clock to the onset of food availability in 100% (49/49) of the line 2 mice in contrast to only 4% (1/24) in line 3 mice. Mice from line 1 and line 4 showed intermediate levels of entrainment, 57% (8/14) and 39% (7/18), respectively. The predictability of entrainment vs. nonentrainment in line 2 and line 3 and the novel entrainment process provide a powerful tool with which to further elucidate mechanisms involved in entrainment of the SCN by scheduled feeding. nonphotic entrainment; scheduled feeding; suprachiasmatic; PER2; wheel running activity THE SUPRACHIASMATIC NUCLEI (SCN) of the anterior hypothalamus are the master circadian (near 24 h) clock in mammals, entraining clocks located in other brain regions and peripheral organs (26,33). The clock mechanism consists of molecular feedback loops containing positive and negative elements, i.e., clock gene products, that cycle with a near 24-h period in the absence of external signals (26). Light, the strongest natural zeitgeber or timing cue, shifts the clock so that it can entrain to the external light/dark (LD) cycle (28). Scheduled food availability is one of several nonphotic periodic signals (24, 25) that have been shown to entrain behavioral rhythms (17,19,22). Although entrainment of the master circadian clock was inferred in these studies (17,19,22), it was not confirmed at the level of the SCN (12).When feeding is dissociated from the normal activity period by allowing animals to eat only during their inactive period, two behavioral activity components result. One component entrains to and is in anticipation of onset of food availability, i.e., food anticipatory activity (FAA), which is controlled by an SCN-independent food-entrainable clock. The other is the animal's normal nocturnal or light-entrainable activity (LEA) component, which is controlled by the SCN when food access is not limited and has been presumed to be controlled by the SCN when access to food is temporally limited (8). The likelihood of the free-running LEA component being entrained by scheduled daily feeding in constant dark (DD) is species dependent. Hamsters typically show behavior...