Phosphoproteomic Analysis and Protein–Protein Interaction of Rat Aorta GJA1 and Rat Heart FKBP1A after Secoiridoid Consumption from Virgin Olive Oil: A Functional Proteomic Approach
Abstract:Protein functional interactions could
explain the biological response
of secoiridoids (SECs), main phenolic compounds in virgin olive oil
(VOO). The aim was to assess protein–protein interactions (PPIs)
of the aorta gap junction alpha-1 (GJA1) and the heart peptidyl-prolyl
cis-trans isomerase (FKBP1A), plus the phosphorylated heart proteome,
to describe new molecular pathways in the cardiovascular system in
rats using nanoliquid chromatography coupled with mass spectrometry.
PPIs modified by SECs and associate… Show more
“…Complete information on the next steps of the proteomic and phosphoproteomic analyses: peptide 11-plex TMT labelling, nanoLC-(Orbitrap)MS/MS analysis, protein identification/quantification, phosphopeptide enrichment and statistical analysis, are detailed in the ESI† section and previously described. 15,24…”
Section: Methodsmentioning
confidence: 99%
“…Complete information on the next steps of the proteomic and phosphoproteomic analyses: peptide 11-plex TMT labelling, nanoLC-(Orbitrap)MS/MS analysis, protein identification/ quantification, phosphopeptide enrichment and statistical analysis, are detailed in the ESI † section and previously described. 15,24 2.12.2 Pathway analysis and protein interaction networks. The initial functional evaluation was performed using the UniProt (https://www.uniprot.org) database, with a focus on protein function and relevant biological processes.…”
Red-fleshed apples (RFA), improve endothelial function and decrease inflammation. RFA induce more improvements in inflammation than aronia infusion (AI), whereas AI improves lipid profile. RFA, white-fleshed apples and AI modulate immune system.
“…Complete information on the next steps of the proteomic and phosphoproteomic analyses: peptide 11-plex TMT labelling, nanoLC-(Orbitrap)MS/MS analysis, protein identification/quantification, phosphopeptide enrichment and statistical analysis, are detailed in the ESI† section and previously described. 15,24…”
Section: Methodsmentioning
confidence: 99%
“…Complete information on the next steps of the proteomic and phosphoproteomic analyses: peptide 11-plex TMT labelling, nanoLC-(Orbitrap)MS/MS analysis, protein identification/ quantification, phosphopeptide enrichment and statistical analysis, are detailed in the ESI † section and previously described. 15,24 2.12.2 Pathway analysis and protein interaction networks. The initial functional evaluation was performed using the UniProt (https://www.uniprot.org) database, with a focus on protein function and relevant biological processes.…”
Red-fleshed apples (RFA), improve endothelial function and decrease inflammation. RFA induce more improvements in inflammation than aronia infusion (AI), whereas AI improves lipid profile. RFA, white-fleshed apples and AI modulate immune system.
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