Kwatisore waters in the Cenderawasih Bay National Park area is one of the whale sharks’ habitats in Indonesia. As shark sightings seem to occur daily there is the opportunity for ecotourism development in the area. This study aims to quantify the occurrence of whale sharks at Kwatisore, and estimate the carrying capacity of the area, together with its suitability for ecotourism based on whale shark aggregations. Primary data collection on the appearance of whale sharks was carried out every day through a census technique on 7 designated areas (Apr to Aug, 2022). Every whale shark that appears on the surface of the water is photographed and identified by an ID number based on the I3Sv2.0 and its sex determined. During the census period, 709 whale sharks’ sightings were recorded mostly in the morning. There were 15 individuals in total, all males with a total length ranging from 3-7 m. The carrying capacity of the area for whale shark ecotourism in Kwatisore waters is a maximum of 252 people per day who are allowed to interact with whale sharks, while the tourism suitability index is included in the very appropriate category for whale shark tourism.