DisclaimerThe University of Gloucestershire has obtained warranties from all depositors as to their title in the material deposited and as to their right to deposit such material.The University of Gloucestershire makes no representation or warranties of commercial utility, title, or fitness for a particular purpose or any other warranty, express or implied in respect of any material deposited.The University of Gloucestershire makes no representation that the use of the materials will not infringe any patent, copyright, trademark or other property or proprietary rights.The University of Gloucestershire accepts no liability for any infringement of intellectual property rights in any material deposited but will remove such material from public view pending investigation in the event of an allegation of any such infringement. PLEASE SCROLL DOWN FOR TEXT. Microbial relationships between birds and nesting environments are complex and remain poorly understood. Past studies have focused on between-nest variation in egg/chick bacterial profiles with little attention given to the microbial relationships between adult birds and their nests. Moreover, very little microbial research has included mycology despite fungi being prevalent in nesting environments and important correlates of fitness in chicks. In this study, we identified microbes associated with feathers, skin and nests of Pied Flycatchers Ficedula hypoleuca, an internationally-declining migrant songbird. From 75 samples, we isolated 50 bacterial OTUs (Operational Taxonomic Units; dominated by Enterococcus, Sanguibacter, Pseduomonas) and 63 fungal OTUs (dominated by Penicillium, Aspergillus), many of which had not previously been isolated from birds. Although females had significantly higher non-haemolytic bacterial OTU richness and males significantly higher fungal OTU richness, there was considerable diversity in actual OTUs isolated and thus there was no "typical" female, male, or nest microbial profile. Interestingly though, we show for the first time that the microflora of individual females is significantly more similar the microflora of her own nest than the site-level average of all nests. This suggests microbes are shared within female-nest pairs such that microbial communities start to converge. This is probably a two-way interaction as gut/skin microbes were isolated from nests and plant/soil microbes were isolated from females. Convergence was not seen for males, which probably reflects the role of the female as sole nest builder and egg incubator in this species. We discuss these findings in relation to microbial transfer pathways and avian nesting behaviour. The avian origins of some nest microbes, and species-specific differences in material used to construct nests, means that it is not surprising that there is considerable interspecific variation in nest microflora. This has been demonstrated in direct comparative studies by Goodenough and Stallwood (2010) and Peralta-Sánchez et al (2012), and is also evident by comparing single-species studies by...