Herein, the pivotal role of secondaryn ucleation in ac rystallization-enhanced deracemization process is reported. During this process, complete and rapid deracemization of chiral conglomerate crystalso fa ni soindolinone is attained through fast microwave-assistedt emperature cycling. Ap arametric study of the main factorst hat affect the occurrence of secondary nucleation in this process, namely agitation rate, suspension density,a nd solutes upersaturation, confirmst hat an enhanced stereoselective secondary nucleation rate maximizest he deracemizationr ate. Analysis of the systemd uring as ingle temperature cycle showed that, although stereoselective particlep roduction during the crystallization stage leadstoenantiomeric enrichment, undesired kinetic dissolution of smaller particleso ft he preferred enantiomero ccurs during the dissolution step. Therefore, secondary nucleationi sc rucial for the enhancemento fd eracemization through temperature cycles and as such should be considered in further design and optimization of this process, as well as in other temperature cyclingp rocesses commonly applied in particle engineering.