In Arabidopsis, oxidation of the large (46-kDa) isoform activase to form a disulfide bond in the C-terminal extension (C-extension) significantly increases its ADP sensitivity for both ATP hydrolysis and ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) activation, thereby decreasing both activities at physiological ratios of ADP/ATP. In this study, we demonstrate that the C-extension of the oxidized large activase isoform can be cross-linked with regions containing residues that contribute to the nucleotide-binding pocket, with a higher efficiency in the presence of ADP or the absence of nucleotides than with ATP. Coupled with measurements demonstrating a redox-dependent protease sensitivity of the C-extension and a lower ATP or adenosine 5 -O-(thiotriphosphate) (ATP␥S) affinity of the oxidized large isoform than either the reduced form or the smaller isoform, the results suggest that the C-extension plays an inhibitory role in ATP hydrolysis, regulated by redox changes. In contrast, the ADP affinities of the small isoform and the reduced or oxidized large isoform were similar, which indicates that the C-extension selectively interferes with the proper binding of ATP, possibly by interfering with the coordination of the ␥-phosphate. Furthermore, replacement of conserved, negatively charged residues (Asp 390 , Glu 394 , and Asp 401 ) in the C-extension with alanine significantly reduced the sensitivities of the mutants to ADP inhibition, which suggests the involvement of electrostatic interactions between them and positively charged residues in or near the nucleotide-binding pocket. These studies provide new insights into the mechanism of redox regulation of activase by the C-extension in the large isoform.Rubisco 2 activase, a nuclear-encoded chloroplast protein, facilitates the conversion of Rubisco from an inactive to active form by releasing tightly bound, inhibitory sugar phosphates from the active site (1). This process requires ATP hydrolysis by activase and is inhibited by ADP (2). Activase belongs to an AAA ϩ (ATPase associated with diverse cellular activities) protein family, based on sequence homology of its central portion with common AAA motifs, and each monomer contains one nucleotide-binding pocket consisting of residues from Walker A, Walker B, and Sensor 1 domains (1, 3). Site-directed mutagenesis and photoaffinity labeling (4-6) showed that the Walker A motif (GXXXGKS; P-loop) is involved in nucleotide binding. A conserved aspartate residue in the Walker B motif (hhhhDEXX, h ϭ hydrophobic residue) is involved in metal ligand binding and ATP catalysis (7). The Sensor 1 region has also been implicated in the binding/coordination of ATP (6, 7). Recently, two residues in the Sensor 2 domain were identified as determining specificity for Rubisco (8), in agreement with the involvement of this motif in substrate recognition in other AAA ϩ members. Several residues in Box VII, which is part of the linkage between the Sensor 1 and Sensor 2 motifs, are essential for maintaining a functional enzym...