In this paper, a thermoelectric conversion system for multiple heat sources is proposed. For design convenience, the overall system employs only a single-stage converter. Such a converter uses coupling inductors and switched capacitors to increase the voltage gain. In order to reduce the high-frequency voltage oscillation of the turn-off of the main switches created from leakage inductors, two active clamp circuits with zero voltage switching (ZVS) turn-on are employed. By doing so, although the current-sharing device with interleave control is embedded in the proposed converter, the input currents can be unequal. Therefore, the inputs of the converter can operate under individual maximum power points and transfer the energy from different thermoelectric generators (TGs) to a single load. Furthermore, the main switches have low voltage stress during the turn-off period. As for the maximum power point tracking (MPPT) method, it utilizes a three-point-weighting method to improve the tracking stability. In addition, the number of inputs of this converter can be extended. The MPPT simulation is presented to verify the feasibility as well as several experimental waveforms to demonstrate the effectiveness. The field programmable gate array (FPGA) is used as a digital control kernel to control the thermoelectric conversion system.