Objectives:
The present study has explored the prevalence and potential factors contributing to the presence of nasal/pharyngeal resistant genes in homeless people.
Methods:
During the winters 2014–2018, we enrolled sheltered homeless adults and controls and collected nasal/pharyngeal samples. Sixteen antibiotic resistance genes (ARGs), including genes encoding for beta-lactamases and colistin-resistance genes, were searched by real-time polymerase chain reaction (qPCR) performed directly on respiratory samples and followed by conventional PCR and sequencing.
Results:
Over a 5-year period, using qPCR, we identified in homeless group (n=715) the presence of
bla
TEM
(396/710, 54.7%),
bla
SHV
(27/708, 3.6%),
bla
OXA-23
(1/708, 0.1%), while other genes including colistin-resistance genes (
mcr
-1 to
mcr
-5) were absent. We found a significantly higher proportion of ARG carriage among controls (74.1%) compared to homeless population (57.1%),
p
=0.038. Tobacco smoking (OR=4.72,
p
<0.0001) and respiratory clinical signs (OR=4.03,
p
=0.002) were most prevalent in homeless people, while vaccination against influenza (OR=0.31,
p
=0.016) was lower compared to controls. Among homeless people, type of housing (shelter A versus B, OR=1.59,
p
=0.006) and smoking tobacco (smoker versus non-smoker, OR=0.55,
p
=0.001) were independent factors associated with ARG carriage. By sequencing, we obtained a high diversity of
bla
TEM
and
bla
SHV
in both populations.
Conclusion:
The lower risk for ARGs in the homeless population could be explained by limited access to health care and subsequently reduced exposure to antibiotics.